A tidy approach to analysis of biological sequences. All processing and data-storage functions are heavily optimized to allow the fastest and most efficient data storage.
Version: | 1.2.1 |
Depends: | R (≥ 3.0.0) |
Imports: | checkmate (≥ 1.9.0), cli (≥ 2.0.0), crayon (≥ 1.3.4), dplyr (≥ 1.0.2), pillar (≥ 1.4.2), Rcpp (≥ 1.0.1), tibble (≥ 2.1.3), vctrs (≥ 0.3.0) |
LinkingTo: | Rcpp, testthat |
Suggests: | ape (≥ 5.3), bioseq (≥ 0.1.2), Biostrings (≥ 2.52.0), covr, knitr, lifecycle, purrr, seqinr (≥ 3.4-5), spelling, rmarkdown, testthat (≥ 3.0.0), withr (≥ 2.2.0), rlang, mockr |
Published: | 2024-10-06 |
DOI: | 10.32614/CRAN.package.tidysq |
Author: | Dominik Rafacz [cre, aut], Michal Burdukiewicz [aut], Laura Bakala [aut], Leon Eyrich Jessen [ctb], Stefan Roediger [ctb], Jadwiga Slowik [ctb], Weronika Puchala [ctb], Katarzyna Sidorczuk [ctb], Filip Pietluch [ctb], Jaroslaw Chilimoniuk [ctb] |
Maintainer: | Dominik Rafacz <dominikrafacz at gmail.com> |
BugReports: | https://github.com/BioGenies/tidysq/issues |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | https://github.com/BioGenies/tidysq |
NeedsCompilation: | yes |
SystemRequirements: | GNU make, C++17 |
Language: | en-US |
Materials: | README NEWS |
CRAN checks: | tidysq results |
Reference manual: | tidysq.pdf |
Vignettes: |
Advanced alphabet techniques (source, R code) Quick Start (source, R code) |
Package source: | tidysq_1.2.1.tar.gz |
Windows binaries: | r-devel: tidysq_1.2.1.zip, r-release: tidysq_1.2.1.zip, r-oldrel: tidysq_1.2.1.zip |
macOS binaries: | r-release (arm64): tidysq_1.2.1.tgz, r-oldrel (arm64): tidysq_1.2.1.tgz, r-release (x86_64): tidysq_1.2.1.tgz, r-oldrel (x86_64): tidysq_1.2.1.tgz |
Old sources: | tidysq archive |
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