Data-driven fMRI denoising with projection scrubbing (Pham et al (2022) <doi:10.1016/j.neuroimage.2023.119972>). Also includes routines for DVARS (Derivatives VARianceS) (Afyouni and Nichols (2018) <doi:10.1016/j.neuroimage.2017.12.098>), motion scrubbing (Power et al (2012) <doi:10.1016/j.neuroimage.2011.10.018>), aCompCor (anatomical Components Correction) (Muschelli et al (2014) <doi:10.1016/j.neuroimage.2014.03.028>), detrending, and nuisance regression. Projection scrubbing is also applicable to other outlier detection tasks involving high-dimensional data.
Version: | 0.14.5 |
Depends: | R (≥ 3.5.0) |
Imports: | MASS, cellWise, e1071, fMRItools (≥ 0.2.2), pesel, robustbase, stats, expm, utils, gamlss |
Suggests: | corpcor, cowplot, ciftiTools, gifti, knitr, rmarkdown, RNifti, ggplot2, fastICA, oro.nifti, testthat (≥ 3.0.0), covr |
Published: | 2023-10-25 |
DOI: | 10.32614/CRAN.package.fMRIscrub |
Author: | Amanda Mejia [aut, cre], John Muschelli [aut], Damon Pham [aut], Daniel McDonald [ctb], Fatma Parlak [ctb] |
Maintainer: | Amanda Mejia <mandy.mejia at gmail.com> |
BugReports: | https://github.com/mandymejia/fMRIscrub/issues |
License: | GPL-3 |
URL: | https://github.com/mandymejia/fMRIscrub |
NeedsCompilation: | no |
Citation: | fMRIscrub citation info |
Materials: | README NEWS |
CRAN checks: | fMRIscrub results |
Reference manual: | fMRIscrub.pdf |
Package source: | fMRIscrub_0.14.5.tar.gz |
Windows binaries: | r-devel: fMRIscrub_0.14.5.zip, r-release: fMRIscrub_0.14.5.zip, r-oldrel: fMRIscrub_0.14.5.zip |
macOS binaries: | r-release (arm64): fMRIscrub_0.14.5.tgz, r-oldrel (arm64): fMRIscrub_0.14.5.tgz, r-release (x86_64): fMRIscrub_0.14.5.tgz, r-oldrel (x86_64): fMRIscrub_0.14.5.tgz |
Old sources: | fMRIscrub archive |
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