A flexible framework for Agent-Based Models (ABM), the 'epiworldR' package provides methods for prototyping disease outbreaks and transmission models using a 'C++' backend, making it very fast. It supports multiple epidemiological models, including the Susceptible-Infected-Susceptible (SIS), Susceptible-Infected-Removed (SIR), Susceptible-Exposed-Infected-Removed (SEIR), and others, involving arbitrary mitigation policies and multiple-disease models. Users can specify infectiousness/susceptibility rates as a function of agents' features, providing great complexity for the model dynamics. Furthermore, 'epiworldR' is ideal for simulation studies featuring large populations.
Version: | 0.1-0 |
Imports: | utils |
LinkingTo: | cpp11 |
Suggests: | knitr, rmarkdown, tinytest, netplot, igraph, data.table |
Published: | 2024-04-08 |
DOI: | 10.32614/CRAN.package.epiworldR |
Author: | Derek Meyer [aut, cre], George Vega Yon [aut], Susan Holmes [rev] (JOSS reviewer), Abinash Satapathy [rev] (JOSS reviewer), Carinogurjao [rev], Centers for Disease Control and Prevention [fnd] (Award number 1U01CK000585; 75D30121F00003) |
Maintainer: | Derek Meyer <derekmeyer37 at gmail.com> |
BugReports: | https://github.com/UofUEpiBio/epiworldR/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/UofUEpiBio/epiworldR, https://uofuepibio.github.io/epiworldR/, https://uofuepibio.github.io/epiworldR-workshop/ |
NeedsCompilation: | yes |
Citation: | epiworldR citation info |
Materials: | README NEWS |
CRAN checks: | epiworldR results [issues need fixing before 2024-10-09] |
Reference manual: | epiworldR.pdf |
Vignettes: |
Getting started with epiworldR Implementation details of epiworldR Run Multiple |
Package source: | epiworldR_0.1-0.tar.gz |
Windows binaries: | r-devel: epiworldR_0.1-0.zip, r-release: epiworldR_0.1-0.zip, r-oldrel: epiworldR_0.1-0.zip |
macOS binaries: | r-release (arm64): epiworldR_0.1-0.tgz, r-oldrel (arm64): epiworldR_0.1-0.tgz, r-release (x86_64): epiworldR_0.1-0.tgz, r-oldrel (x86_64): epiworldR_0.1-0.tgz |
Old sources: | epiworldR archive |
Reverse imports: | epiworldRShiny |
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