CRAN Package Check Results for Package phylobase

Last updated on 2026-08-01 09:50:43 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8.12 30.40 135.34 165.74 NOTE
r-devel-linux-x86_64-debian-gcc 0.8.12 20.61 98.55 119.16 NOTE
r-devel-linux-x86_64-fedora-clang 0.8.12 43.00 202.06 245.06 OK
r-devel-linux-x86_64-fedora-gcc 0.8.12 23.00 93.51 116.51 NOTE
r-devel-windows-x86_64 0.8.12 39.00 159.00 198.00 NOTE
r-patched-linux-x86_64 0.8.12 31.38 127.20 158.58 OK
r-release-linux-x86_64 0.8.12 29.00 127.46 156.46 OK
r-release-macos-arm64 0.8.12 7.00 34.00 41.00 OK
r-release-macos-x86_64 0.8.12 19.00 144.00 163.00 OK
r-release-windows-x86_64 0.8.12 37.00 172.00 209.00 OK
r-oldrel-macos-arm64 0.8.12 OK
r-oldrel-macos-x86_64 0.8.12 18.00 129.00 147.00 OK
r-oldrel-windows-x86_64 0.8.12 48.00 211.00 259.00 OK

Check Details

Version: 0.8.12
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Francois Michonneau <francois.michonneau@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = c("R", "Hackathon", "et"), family = "al.", role = "aut", comment = "alphabetically: Ben Bolker, Marguerite Butler,\n Peter Cowan, Damien de Vienne, Dirk Eddelbuettel, Mark Holder, Thibaut\n Jombart, Steve Kembel, Francois Michonneau, David Orme, Brian O'Meara,\n Emmanuel Paradis, Jim Regetz, Derrick Zwickl"), person(given = "Francois", family = "Michonneau", role = "cre", email = "francois.michonneau@gmail.com")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.8.12
Check: R code for possible problems
Result: NOTE Found calls to structure() using deprecated special names: phylobase/tests/testthat/test.class-phylo4.R (.Dim: 1) phylobase/tests/testthat/test.methods-phylo4.R (.Names: 2) '.Dim' should be changed to 'dim'. '.Names' should be changed to 'names'. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.8.12
Check: Rd contents
Result: NOTE Rd files without \usage: ‘phylomat-class.Rd’ \arguments should not be documented without \usage. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.8.12
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0Rj42S’ ‘~/tmp/scratch/Rtmp0UVWTD’ ‘~/tmp/scratch/Rtmp0WISX0’ ‘~/tmp/scratch/Rtmp0r1OgZ’ ‘~/tmp/scratch/Rtmp1TPth2’ ‘~/tmp/scratch/Rtmp1rqAge’ ‘~/tmp/scratch/Rtmp2GCizh’ ‘~/tmp/scratch/Rtmp2lz0pV’ ‘~/tmp/scratch/Rtmp2oYHuB’ ‘~/tmp/scratch/Rtmp3W52yJ’ ‘~/tmp/scratch/Rtmp3vrOW6’ ‘~/tmp/scratch/Rtmp44yPZy’ ‘~/tmp/scratch/Rtmp5B6VNX’ ‘~/tmp/scratch/Rtmp5TXS2X’ ‘~/tmp/scratch/Rtmp5c8uIx’ ‘~/tmp/scratch/Rtmp5xsrGV’ ‘~/tmp/scratch/Rtmp61FwDw’ ‘~/tmp/scratch/Rtmp6Umjl9’ ‘~/tmp/scratch/Rtmp71hk4S’ ‘~/tmp/scratch/Rtmp7WcVmD’ ‘~/tmp/scratch/Rtmp7Zf0YL’ ‘~/tmp/scratch/Rtmp7rlMOm’ ‘~/tmp/scratch/Rtmp8HYHzR’ ‘~/tmp/scratch/Rtmp8kNlE8’ ‘~/tmp/scratch/Rtmp8ooZGU’ ‘~/tmp/scratch/Rtmp9R5yjX’ ‘~/tmp/scratch/Rtmp9d1eqq’ ‘~/tmp/scratch/Rtmp9iSAHM’ ‘~/tmp/scratch/Rtmp9qahNy’ ‘~/tmp/scratch/Rtmp9zPyXh’ ‘~/tmp/scratch/RtmpA1mMxP’ ‘~/tmp/scratch/RtmpAg4ybw’ ‘~/tmp/scratch/RtmpArTd0d’ ‘~/tmp/scratch/RtmpC3UhWa’ ‘~/tmp/scratch/RtmpC7TL2E’ ‘~/tmp/scratch/RtmpCh0v19’ ‘~/tmp/scratch/RtmpDb15vP’ ‘~/tmp/scratch/RtmpF5Jy0o’ ‘~/tmp/scratch/RtmpFDxyMj’ ‘~/tmp/scratch/RtmpFGwIIb’ ‘~/tmp/scratch/RtmpFfSIkQ’ ‘~/tmp/scratch/RtmpFkZlMy’ ‘~/tmp/scratch/RtmpGFGbEV’ ‘~/tmp/scratch/RtmpGOfOMK’ ‘~/tmp/scratch/RtmpGzq6wf’ ‘~/tmp/scratch/RtmpH0laJM’ ‘~/tmp/scratch/RtmpI0ACq8’ ‘~/tmp/scratch/RtmpIOjCio’ ‘~/tmp/scratch/RtmpIaApMi’ ‘~/tmp/scratch/RtmpJ4j35a’ ‘~/tmp/scratch/RtmpJAzd7n’ ‘~/tmp/scratch/RtmpJSawgk’ ‘~/tmp/scratch/RtmpK2KvxK’ ‘~/tmp/scratch/RtmpKN56M7’ ‘~/tmp/scratch/RtmpKvAlAo’ ‘~/tmp/scratch/RtmpL3gBSP’ ‘~/tmp/scratch/RtmpLe32Py’ ‘~/tmp/scratch/RtmpLhtger’ ‘~/tmp/scratch/RtmpMiKqWw’ ‘~/tmp/scratch/RtmpNToQSf’ ‘~/tmp/scratch/RtmpNUYv7H’ ‘~/tmp/scratch/RtmpNyyups’ ‘~/tmp/scratch/RtmpOAQqxT’ ‘~/tmp/scratch/RtmpODvq34’ ‘~/tmp/scratch/RtmpOQpN0A’ ‘~/tmp/scratch/RtmpOebzFO’ ‘~/tmp/scratch/RtmpOiuIKd’ ‘~/tmp/scratch/RtmpOtoMuh’ ‘~/tmp/scratch/RtmpPbDKhk’ ‘~/tmp/scratch/RtmpQB4lMw’ ‘~/tmp/scratch/RtmpQWYZ5d’ ‘~/tmp/scratch/RtmpQiygUL’ ‘~/tmp/scratch/RtmpREtgdc’ ‘~/tmp/scratch/RtmpRI8xGc’ ‘~/tmp/scratch/RtmpRPxfHv’ ‘~/tmp/scratch/RtmpRWxro0’ ‘~/tmp/scratch/RtmpS6600k’ ‘~/tmp/scratch/RtmpSizOhw’ ‘~/tmp/scratch/RtmpSxxa41’ ‘~/tmp/scratch/RtmpT2zdbK’ ‘~/tmp/scratch/RtmpT3hIQc’ ‘~/tmp/scratch/RtmpT7M97C’ ‘~/tmp/scratch/RtmpT8qSNV’ ‘~/tmp/scratch/RtmpTDXfn7’ ‘~/tmp/scratch/RtmpTG5bRV’ ‘~/tmp/scratch/RtmpUk560x’ ‘~/tmp/scratch/RtmpVG5o29’ ‘~/tmp/scratch/RtmpVGAXUk’ ‘~/tmp/scratch/RtmpVGMrZb’ ‘~/tmp/scratch/RtmpWs0L6e’ ‘~/tmp/scratch/RtmpXNLLai’ ‘~/tmp/scratch/RtmpXVt5Cm’ ‘~/tmp/scratch/RtmpXZScfk’ ‘~/tmp/scratch/RtmpXhbNIp’ ‘~/tmp/scratch/RtmpY1f7qh’ ‘~/tmp/scratch/RtmpY4sbwT’ ‘~/tmp/scratch/RtmpYMT5St’ ‘~/tmp/scratch/RtmpYrej5e’ ‘~/tmp/scratch/RtmpYv9zDP’ ‘~/tmp/scratch/RtmpZdr27q’ ‘~/tmp/scratch/RtmpaXyaLY’ ‘~/tmp/scratch/Rtmpaa9Ws6’ ‘~/tmp/scratch/RtmpbfWXjw’ ‘~/tmp/scratch/Rtmpbv8hno’ ‘~/tmp/scratch/RtmpcJDx8C’ ‘~/tmp/scratch/RtmpcyyUCi’ ‘~/tmp/scratch/RtmpdGVgjl’ ‘~/tmp/scratch/RtmpdN61pn’ ‘~/tmp/scratch/Rtmpdw7gkP’ ‘~/tmp/scratch/Rtmpe7URjs’ ‘~/tmp/scratch/RtmpelZoLp’ ‘~/tmp/scratch/RtmpeoOYLk’ ‘~/tmp/scratch/Rtmpetadk3’ ‘~/tmp/scratch/Rtmpf9849q’ ‘~/tmp/scratch/Rtmpgg3LhD’ ‘~/tmp/scratch/RtmpglTMSs’ ‘~/tmp/scratch/RtmphKZ4PS’ ‘~/tmp/scratch/RtmphROcAu’ ‘~/tmp/scratch/RtmphVujzG’ ‘~/tmp/scratch/RtmphiC04N’ ‘~/tmp/scratch/RtmphnVogL’ ‘~/tmp/scratch/RtmpiFwfe5’ ‘~/tmp/scratch/RtmpjM5vxY’ ‘~/tmp/scratch/RtmpjYhi0k’ ‘~/tmp/scratch/Rtmpjt61d9’ ‘~/tmp/scratch/RtmpkHewIx’ ‘~/tmp/scratch/RtmpkmE8PN’ ‘~/tmp/scratch/RtmpkoclC8’ ‘~/tmp/scratch/RtmpkzYlz9’ ‘~/tmp/scratch/Rtmpl9IhUn’ ‘~/tmp/scratch/RtmplHMAkA’ ‘~/tmp/scratch/Rtmpn9Kfn5’ ‘~/tmp/scratch/RtmpnClFs4’ ‘~/tmp/scratch/RtmpnT9m5i’ ‘~/tmp/scratch/Rtmpng3NNW’ ‘~/tmp/scratch/RtmpnkfODX’ ‘~/tmp/scratch/RtmpoJ5By7’ ‘~/tmp/scratch/RtmpoJXHqw’ ‘~/tmp/scratch/RtmppNd7DF’ ‘~/tmp/scratch/RtmppxykTR’ ‘~/tmp/scratch/RtmpqEWet8’ ‘~/tmp/scratch/RtmpqH9RKD’ ‘~/tmp/scratch/RtmpqdhJO3’ ‘~/tmp/scratch/RtmpquifnB’ ‘~/tmp/scratch/RtmprEDp7o’ ‘~/tmp/scratch/RtmprX5nTm’ ‘~/tmp/scratch/RtmprZD5rU’ ‘~/tmp/scratch/Rtmps17QP0’ ‘~/tmp/scratch/Rtmps7oItE’ ‘~/tmp/scratch/RtmpsA4Ual’ ‘~/tmp/scratch/RtmpsI2SEv’ ‘~/tmp/scratch/RtmpsNKhUm’ ‘~/tmp/scratch/RtmpsPk5qK’ ‘~/tmp/scratch/RtmpsUcLwX’ ‘~/tmp/scratch/RtmptCBZef’ ‘~/tmp/scratch/RtmptPXa4C’ ‘~/tmp/scratch/RtmpuRMnIc’ ‘~/tmp/scratch/Rtmpv30zuq’ ‘~/tmp/scratch/RtmpvDvhhg’ ‘~/tmp/scratch/RtmpvSscZb’ ‘~/tmp/scratch/RtmpxOkhQy’ ‘~/tmp/scratch/Rtmpxzp8Bb’ ‘~/tmp/scratch/Rtmpz5t1IO’ ‘~/tmp/scratch/Rtmpzc9b9t’ ‘~/tmp/scratch/xvfb-run.2NxjtW’ ‘~/tmp/scratch/xvfb-run.3msDQb’ ‘~/tmp/scratch/xvfb-run.3pgemt’ ‘~/tmp/scratch/xvfb-run.4iN4rs’ ‘~/tmp/scratch/xvfb-run.4zzLPi’ ‘~/tmp/scratch/xvfb-run.6GsgxU’ ‘~/tmp/scratch/xvfb-run.6VVecq’ ‘~/tmp/scratch/xvfb-run.6n9k7b’ ‘~/tmp/scratch/xvfb-run.9WonYw’ ‘~/tmp/scratch/xvfb-run.9eejuM’ ‘~/tmp/scratch/xvfb-run.AzJ8JE’ ‘~/tmp/scratch/xvfb-run.BpgLs1’ ‘~/tmp/scratch/xvfb-run.DB4Vsu’ ‘~/tmp/scratch/xvfb-run.EGwkIL’ ‘~/tmp/scratch/xvfb-run.GWB00R’ ‘~/tmp/scratch/xvfb-run.GbHSvn’ ‘~/tmp/scratch/xvfb-run.Gl0dXi’ ‘~/tmp/scratch/xvfb-run.GtzbcZ’ ‘~/tmp/scratch/xvfb-run.Hh4awe’ ‘~/tmp/scratch/xvfb-run.HpLgyW’ ‘~/tmp/scratch/xvfb-run.I6rCd8’ ‘~/tmp/scratch/xvfb-run.Ktsrl0’ ‘~/tmp/scratch/xvfb-run.LrrS6q’ ‘~/tmp/scratch/xvfb-run.LtXMRV’ ‘~/tmp/scratch/xvfb-run.NHKltq’ ‘~/tmp/scratch/xvfb-run.NTEDbh’ ‘~/tmp/scratch/xvfb-run.Ni8Sg2’ ‘~/tmp/scratch/xvfb-run.QcXQUB’ ‘~/tmp/scratch/xvfb-run.QyLnhF’ ‘~/tmp/scratch/xvfb-run.RLb7lo’ ‘~/tmp/scratch/xvfb-run.Sp4ANV’ ‘~/tmp/scratch/xvfb-run.SwGdGo’ ‘~/tmp/scratch/xvfb-run.TE1Tks’ ‘~/tmp/scratch/xvfb-run.TTCVV4’ ‘~/tmp/scratch/xvfb-run.V7OwkE’ ‘~/tmp/scratch/xvfb-run.VDNpeZ’ ‘~/tmp/scratch/xvfb-run.VZYrbq’ ‘~/tmp/scratch/xvfb-run.X4XwFh’ ‘~/tmp/scratch/xvfb-run.XdBasQ’ ‘~/tmp/scratch/xvfb-run.Y33jVj’ ‘~/tmp/scratch/xvfb-run.YH6sQR’ ‘~/tmp/scratch/xvfb-run.YV8Dff’ ‘~/tmp/scratch/xvfb-run.Z2v44L’ ‘~/tmp/scratch/xvfb-run.a3MZ4q’ ‘~/tmp/scratch/xvfb-run.bbxgkw’ ‘~/tmp/scratch/xvfb-run.cXeCD4’ ‘~/tmp/scratch/xvfb-run.eCqwak’ ‘~/tmp/scratch/xvfb-run.ei4AKC’ ‘~/tmp/scratch/xvfb-run.fL656t’ ‘~/tmp/scratch/xvfb-run.gSkdE8’ ‘~/tmp/scratch/xvfb-run.gyXRvz’ ‘~/tmp/scratch/xvfb-run.hC4YOa’ ‘~/tmp/scratch/xvfb-run.iauinB’ ‘~/tmp/scratch/xvfb-run.jEHJdf’ ‘~/tmp/scratch/xvfb-run.m8rzzZ’ ‘~/tmp/scratch/xvfb-run.nD5K2Z’ ‘~/tmp/scratch/xvfb-run.onXnJD’ ‘~/tmp/scratch/xvfb-run.qIpKzb’ ‘~/tmp/scratch/xvfb-run.qmV1xJ’ ‘~/tmp/scratch/xvfb-run.rOkmKl’ ‘~/tmp/scratch/xvfb-run.s4Xa8q’ ‘~/tmp/scratch/xvfb-run.sQCQCc’ ‘~/tmp/scratch/xvfb-run.tA2RFu’ ‘~/tmp/scratch/xvfb-run.tEUyzU’ ‘~/tmp/scratch/xvfb-run.tHDl8O’ ‘~/tmp/scratch/xvfb-run.ueTipA’ ‘~/tmp/scratch/xvfb-run.uqfjDH’ ‘~/tmp/scratch/xvfb-run.uzEh3h’ ‘~/tmp/scratch/xvfb-run.vO8bQt’ ‘~/tmp/scratch/xvfb-run.xpsl7o’ Flavor: r-devel-linux-x86_64-debian-gcc