Pipeline views

Pipelines can get long, and often you want to focus on a subset of steps: a topic, a stage, or the steps that produce the outputs you care about. Views are {pipeflow}’s way of working on a subset of steps without copying anything. A view references the underlying pipeline, so every operation applied to a view (running it, updating parameters, tagging, locking, …) writes through to the original pipeline, restricted to the steps covered by the view.

This vignette shows how to create and combine views, how to select steps with the [ operator, how views behave when the pipeline changes, and how to run only part of a pipeline.

Setup

Again, we use a very simplified example of a pipeline.

library(pipeflow)

pip <- pip_new("my-pip") |>
    pip_add("load", \(n = 5) seq_len(n), tags = c("io", "daily")) |>
    pip_add("clean", \(x = ~load) x * 2, tags = c("io", "core")) |>
    pip_add("fit", \(x = ~clean) sum(x), tags = c("model", "core")) |>
    pip_add("report", \(x = ~fit) paste("result:", x), tags = "report")

As you see above, besides step and fun, pip_add() also allows to set tags. We will use these tags as meta information to filter certain steps by topic and/or output type. Let’s do a first run before we move on.

(pip_run(pip, lgr = NULL))
# <pipeflow> my-pip (4 steps)
# ---------------------------
#      step params depends state            out       tags
# 1:   load      n          done      1,2,3,4,5   io,daily
# 2:  clean      x    load  done  2, 4, 6, 8,10    io,core
# 3:    fit      x   clean  done             30 model,core
# 4: report      x     fit  done     result: 30     report
# ---------------------------
# <ready> last run: 2026-10-13 16:15:57

Creating views

pip_view() returns a view of the pipeline that contains only the steps matching the given filters:

pip_view(pip, tags = "core")
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:57

Filters can be combined. By default, steps must match all filters (logical AND), while the values within a single filter are treated as alternatives (OR):

pip_view(pip, tags = "core", state = "done")
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:57

pip_view(pip, step = c("clean", "fit"))
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:57

join = "union" keeps steps that match any filter:

pip_view(pip, tags = "report", step = "clean", join = "union")
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#      step params depends state            out    tags
# 1:  clean      x    load  done  2, 4, 6, 8,10 io,core
# 2: report      x     fit  done     result: 30  report
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:57

With fixed = FALSE, filter values are interpreted as regular expressions:

pip_view(pip, step = "^f", fixed = FALSE)
# <pipeflow_view> my-pip (1 of 4 steps)
# -------------------------------------
#    step params depends state out       tags
# 1:  fit      x   clean  done  30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:57

The available filters are step, params, state, exec, tags, and depends. For example, to find all steps that depend on load and are still new:

pip_reset(pip) # reset to initial state

pip_view(pip, depends = "load", state = "new")
# <pipeflow_view> my-pip (1 of 4 steps)
# -------------------------------------
#     step params depends state    tags
# 1: clean      x    load   new io,core
# -------------------------------------
# <ready> last run: never

Selecting steps with [

The extract operator [ provides a data.table-like way of selecting steps. It returns a view by default:

pip_run(pip, lgr = NULL)
pip[c("load", "fit")]
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#    step params depends state       out       tags
# 1: load      n          done 1,2,3,4,5   io,daily
# 2:  fit      x   clean  done        30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

pip[1:3]
# <pipeflow_view> my-pip (3 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1:  load      n          done      1,2,3,4,5   io,daily
# 2: clean      x    load  done  2, 4, 6, 8,10    io,core
# 3:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

Boolean filters are evaluated in the context of the step table, so the same columns as in pip_view() are available as variables:

pip[tags %like% "core"]
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

pip[step %in% c("clean", "fit") & state == "done"]
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

Note that %like% matches the tags of each step as a single string, such as 'c("model", "core")', or "character(0)" for a step without tags. A pattern can therefore match more steps than intended, so to select steps by their tags, pip_view(tags = ) is the safer choice.

Negative indices select all steps except the excluded ones:

pip[-2]
# <pipeflow_view> my-pip (3 of 4 steps)
# -------------------------------------
#      step params depends state        out       tags
# 1:   load      n          done  1,2,3,4,5   io,daily
# 2:    fit      x   clean  done         30 model,core
# 3: report      x     fit  done result: 30     report
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

p[] returns a copy of the pipeline, and using two indices (p[i, j]) extracts the given rows and columns as a data.table:

pip2 <- pip[]

pip[, c("step", "tags")]
#      step       tags
#    <char>     <list>
# 1:   load   io,daily
# 2:  clean    io,core
# 3:    fit model,core
# 4: report     report

pip[c("load", "fit"), "out"]
#          out
#       <list>
# 1: 1,2,3,4,5
# 2:        30

While [ returns a view by default, view = FALSE builds a new, self-contained pipeline containing the selected steps together with all their upstream dependencies:

pip[c("fit", "report"), view = FALSE]
# pulled in 2 upstream dependencies
# <pipeflow> my-pip (4 steps)
# ---------------------------
#      step params depends state            out       tags
# 1:   load      n          done      1,2,3,4,5   io,daily
# 2:  clean      x    load  done  2, 4, 6, 8,10    io,core
# 3:    fit      x   clean  done             30 model,core
# 4: report      x     fit  done     result: 30     report
# ---------------------------
# <ready> last run: never

The printed message tells you how many steps were pulled in as upstream dependencies.

Composing views

Views can be nested: applying pip_view() (or [) to a view narrows the view further.

v1 <- pip_view(pip, tags = "io") # load, clean
v1
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out     tags
# 1:  load      n          done      1,2,3,4,5 io,daily
# 2: clean      x    load  done  2, 4, 6, 8,10  io,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

v2 <- v1 |> pip_view(tags = "core") # clean only
v2
# <pipeflow_view> my-pip (1 of 4 steps)
# -------------------------------------
#     step params depends state            out    tags
# 1: clean      x    load  done  2, 4, 6, 8,10 io,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

The view meta field

Under the hood, a view stores the steps it covers in the view meta field of the pipeline object (NULL for a full pipeline). Reading the field returns the names of the covered steps, so in principle you can also manipulate the view directly by assigning step names to the meta field1.

pip[["view"]] # NULL — not a view
# NULL

w <- pip
w[["view"]] <- c("load", "clean")
w
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out     tags
# 1:  load      n          done      1,2,3,4,5 io,daily
# 2: clean      x    load  done  2, 4, 6, 8,10  io,core
# -------------------------------------
# <ready> last run: 2026-10-13 16:15:59

w[["view"]] <- NULL # back to the full pipeline
w
# <pipeflow> my-pip (4 steps)
# ---------------------------
#      step params depends state            out       tags
# 1:   load      n          done      1,2,3,4,5   io,daily
# 2:  clean      x    load  done  2, 4, 6, 8,10    io,core
# 3:    fit      x   clean  done             30 model,core
# 4: report      x     fit  done     result: 30     report
# ---------------------------
# <ready> last run: 2026-10-13 16:15:59

When the pipeline changes

A view keeps covering its steps when the pipeline changes later, no matter whether the change is made through the view, another view, or the pipeline itself. Renamed steps stay in the view under their new name, and removed steps drop out of it. New steps are not added to an existing view, even if they match the view’s filters.

q <- pip_clone(pip)
v <- pip_view(q, tags = "core")
v
# <pipeflow_view> my-pip (2 of 4 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2:   fit      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: never

# A new "core" step is not added to the existing view
pip_add(q, "check", \(x = ~clean) all(x > 0), tags = "core", after = "clean")

# A renamed step stays in the view under its new name
pip_rename(q, from = "fit", to = "model")
v
# <pipeflow_view> my-pip (2 of 5 steps)
# -------------------------------------
#     step params depends state            out       tags
# 1: clean      x    load  done  2, 4, 6, 8,10    io,core
# 2: model      x   clean  done             30 model,core
# -------------------------------------
# <ready> last run: never

# Removed steps drop out of the view
pip_remove(q, "model", force = TRUE)
# Removing step 'model' and its downstream dependencies: 'report'
v
# <pipeflow_view> my-pip (1 of 3 steps)
# -------------------------------------
#     step params depends state            out    tags
# 1: clean      x    load  done  2, 4, 6, 8,10 io,core
# -------------------------------------
# <ready> last run: never

Running views

Running a view executes the covered steps together with any upstream dependencies that are not up to date. The run log marks steps that belong to the view as [view] and steps that were pulled in as dependencies as [upstream]:

pip_reset(pip)
pip_run(pip_view(pip, step = "report"))
# info [2026-10-13 14:16:02.871 UTC]: Starting run of pipeflow 'my-pip'
# info [2026-10-13 14:16:02.872 UTC]: Step 1/4 [upstream] load
# info [2026-10-13 14:16:02.872 UTC]: Step 2/4 [upstream] clean
# info [2026-10-13 14:16:02.873 UTC]: Step 3/4 [upstream] fit
# info [2026-10-13 14:16:02.874 UTC]: Step 4/4 [view] report
# info [2026-10-13 14:16:02.875 UTC]: Finished run of pipeflow 'my-pip'

Afterwards, the original pipeline is up to date for the covered steps.

Pipeline views are not only useful to inspect or run certain parts of the pipeline but also to filter and collect the final output of your analysis run. For more details on this see the next vignette Collect and group output.


  1. Direct manipulation of the view usually is not needed and probably mostly useful for debugging.↩︎