c268014e39ffc4fe9d8e2fdf267a6faf *DESCRIPTION
fca448b418435960fb47fb7d5027a04d *NAMESPACE
a3833e707163911ee0bc207572baeddd *R/analyze.R
89de169ea5b6906d5222b8a0b54b90ff *R/download.R
a49b2b0be7273f17193932b972326b16 *R/global.R
3e69b1a20f412059c21dc385634417ff *R/internal_dealWithGencode.R
2a4caf29443d79d7d51210cc7e784eb1 *R/query.R
fe106e154be78e4d7d4a33595994597d *R/visualize.R
eb2d94e4674cfe5b4c4ae47de6610889 *R/xQTLbiolinks.R
15c6ba985cdb3820e5ec39eceb446d59 *R/zzz.R
8784ef123397deda1d1756747938751e *README.md
3f4fd22cb85e82115b37b750e0225430 *build/vignette.rds
c8a57304cd479c8a8de432a3917b734a *data/ebi_study_tissues.rda
4df226b53bd344760a22b589de8242e4 *data/example_Coloc_colocResultAll.rda
fd188926f94243aaae83d89b741e705d *data/example_Coloc_colocResultsig.rda
c28a332775b45204d9eb1ff55111f741 *data/example_Coloc_gwasDF.rda
1e2a5cd8df06634868548bdd788f1b23 *data/example_Coloc_sentinelSNP.rda
a4f3f38e63c1de7b28891c67ac32503d *data/example_Coloc_traitsAll.rda
5606e37f6eab3b672e0d965e2c55bf1a *data/gencodeGeneInfoAllGranges.rda
bcd024e65be48e78a187ce31acbcffc2 *data/gencodeGenetype.rda
e8fb9a6a0f9fb889a9ed0d210d351569 *data/sampleNum.rda
7471c2566e8b7259039b81064892e6c5 *data/tissueSiteDetailGTExv7.rda
b179116e065de0f1fedd2283bd0fc34e *data/tissueSiteDetailGTExv8.rda
d67d12f8715ac03b61626df578e56deb *inst/doc/Colocalization_analysis_with_xQTLbiolinks.R
2ed38412ce45329dcdf358340f8a5f68 *inst/doc/Colocalization_analysis_with_xQTLbiolinks.Rmd
fd7b262f70fb866d91103adf3ab694e5 *inst/doc/Colocalization_analysis_with_xQTLbiolinks.html
19a65b38970a2a6ada2d8d51e6154130 *inst/doc/Quick_start.R
8ca3d01e264f7ec9e902264acba5e31e *inst/doc/Quick_start.Rmd
62ded399b9e400c301c194fbc3c9a1c3 *inst/doc/Quick_start.html
a74ba817bd8cbca0f067156cfa61e8b2 *inst/doc/eQTL_Specificity.R
66aef54d7d67a676da22eaf2ccaa1dd6 *inst/doc/eQTL_Specificity.Rmd
f16f138619e54370490434f63aaa8637 *inst/doc/eQTL_Specificity.html
0d9889db15d9530ff530bb6613ae1806 *inst/doc/visualization.R
1102027346ed387362105e93a2ce307f *inst/doc/visualization.Rmd
420c314ed33f0835d18b7d31360a284a *inst/doc/visualization.html
2df26cc9a40f9e079f1c8bc54140e4e7 *inst/extdata/hg19ToHg38.over.chain
a9dbcee13d23bfb9b353332652de6030 *man/EBIquery_allTerm.Rd
103199a577b035e30551691de64fe8c9 *man/apiAdmin_ping.Rd
8f206319c4a81e091ea5311b73857bfb *man/apiEbi_ping.Rd
082b0e90b560c3053e7694cd3e4c6767 *man/dbsnpQueryRange.Rd
33f0f6cf593d45dca99155643fbc8019 *man/ebi_study_tissues.Rd
460bfed5eead6c10ea06ddacdfeee28e *man/example_Coloc_colocResultAll.Rd
a349444d8d634fd582fdc07cb422de74 *man/example_Coloc_colocResultsig.Rd
d7cf748e6897789a3463aff3f884ceda *man/example_Coloc_gwasDF.Rd
00516e2b70dc314c6bbc639b57b602b5 *man/example_Coloc_sentinelSNP.Rd
aceacf6b429da61ce4468aa29f1a6ebd *man/example_Coloc_traitsAll.Rd
e44d50aba449c63622a1718d8c5926a2 *man/extractGeneInfo.Rd
6c7e43bcd956a521033dbfa8fa3f739f *man/fetchContent.Rd
1ce91fa420aae4f7a17b0067590234c7 *man/fetchContentEbi.Rd
1548ed10d91a87a6b9cc3c875d53d552 *man/gencodeGeneInfoAllGranges.Rd
9518716fbadab7e83f0ce910f620a4a4 *man/gencodeGenetype.Rd
fcf1e54d7291ae54b53d7b78f7b92233 *man/is.wholenumber.Rd
126bfb5483886e27a47d98cea078d22d *man/retrieveLD.Rd
13c226dd4892413376323c8bd9101b73 *man/sampleNum.Rd
bad94132692ff9d5c175b12bab4c9c9b *man/tissueSiteDetailGTExv7.Rd
cd4fdc67628d6bba2c7901381a94f185 *man/tissueSiteDetailGTExv8.Rd
03a81a42598ac2d67e94f24aaa88ce15 *man/xQTLanalyze_TSExp.Rd
7f4cc1f313f8086efa76b34d9a083246 *man/xQTLanalyze_coloc.Rd
48d66fae99eb8928165ace37711627c9 *man/xQTLanalyze_getSentinelSnp.Rd
761d0a96474f64282a89405076d1e32e *man/xQTLanalyze_getTraits.Rd
eb32335e8d00d10968703144da0f8abc *man/xQTLanalyze_qtlSpecificity.Rd
d862effad519323a6f2958c314f47210 *man/xQTLbiolinks.Rd
586b42ade1ec9cfcb9d294eb083e43f0 *man/xQTLdownload_egene.Rd
71a1804b9284efca6e5a55d68dc82399 *man/xQTLdownload_eqtl.Rd
c40b1ce7824e84d227005d9886513b9f *man/xQTLdownload_eqtlAllAsso.Rd
1c3fd3111141efaa2d377e8c224c66cd *man/xQTLdownload_eqtlAllAssoPos.Rd
fe89e6c0135e80af7c2cc015dca7fbe3 *man/xQTLdownload_eqtlExp.Rd
af8772ad729802662420e79227c66d0c *man/xQTLdownload_eqtlSig.Rd
fc720fca4a439edb2ee8f42cefeac989 *man/xQTLdownload_exp.Rd
cf111892e4a4a33830fc92090a303193 *man/xQTLdownload_geneMedExp.Rd
40edb3567f7374dcedec22a4c1b7101f *man/xQTLdownload_sgene.Rd
199d4e95a9fef45d09a8263c6b993798 *man/xQTLdownload_sqtlExp.Rd
2a3bd5a45086e15dfbc3c857abf4daa4 *man/xQTLdownload_sqtlSig.Rd
3a03188f260c62a964b876684a3fe16b *man/xQTLquery_gene.Rd
0bb172b660dd9c519d9286e129989085 *man/xQTLquery_geneAll.Rd
5fb41fb9e5909a5efcb86a2a006ea0ef *man/xQTLquery_sampleBySampleId.Rd
67c6dfbd9ea8e5657fffa3e45820af3d *man/xQTLquery_sampleByTissue.Rd
b4893bc9dfd7a190fbf5fc66fd1a1c68 *man/xQTLquery_tissue.Rd
1dc899acad0acbee026c63f256a193ea *man/xQTLquery_varId.Rd
386a2df208b6f75f381a95df1591f6a0 *man/xQTLquery_varPos.Rd
6633e1f975ab38564a330da062dfcf96 *man/xQTLvisual_eqtl.Rd
800ffab2eb9e8631d898d1b2493dbdbc *man/xQTLvisual_eqtlExp.Rd
0ab9d1698e1c0284cd135208482eba91 *man/xQTLvisual_geneExpTissues.Rd
1e56bde8141b4c9735e6bd253d02a29c *man/xQTLvisual_genesExp.Rd
f69e4d10e180df4093b468fea42d8109 *man/xQTLvisual_locusCombine.Rd
68004001693ad35aa7dd82cc788541d1 *man/xQTLvisual_locusCompare.Rd
ef85f1801f2af657d1746644ece2e878 *man/xQTLvisual_locusZoom.Rd
611704fcba80abf26a4590b8575a5b88 *man/xQTLvisual_qtlSpecificity.Rd
8506b9b7e41fe8693523ca34f013393a *man/xQTLvisual_sqtlExp.Rd
2ed38412ce45329dcdf358340f8a5f68 *vignettes/Colocalization_analysis_with_xQTLbiolinks.Rmd
8ca3d01e264f7ec9e902264acba5e31e *vignettes/Quick_start.Rmd
66aef54d7d67a676da22eaf2ccaa1dd6 *vignettes/eQTL_Specificity.Rmd
31398274b71ecc2f9b88a2cdd8a87df3 *vignettes/references.bib
1102027346ed387362105e93a2ce307f *vignettes/visualization.Rmd
