8a7e4e110dfdcaa1f6802ef8a50e3dbe *DESCRIPTION
d66d290f5abd059100c483e17c14431d *LICENSE
d205110b0194ea3632a3afe42f30f648 *NAMESPACE
f61b6f5cf00b12354fe00edff5b46218 *NEWS.md
1b54137d4ae82b40a266122de6d1201b *R/DiveR-package.R
5b63bf4c5e8c2d47b52f63c4a884b1e4 *R/concat_conserved_kmer.R
e09151afacf036b44ff7aee748167d55 *R/json2csv.R
1b25de9538afa55e7fc0dbd0f0849331 *R/metadata_extraction.R
f94c3cac14c6457e59f09779d87b0a2a *R/plot_conservationLevel.R
1f3c1fdf49fef1d9561a817d3207d05e *R/plot_correlation.R
68276c7c4f229c506cb244fe85dddc26 *R/plot_dynamics_protein.R
844513de8b487a214596af75a711c53f *R/plot_dynamics_proteome.R
150f0f90360e19ce456a89c2791f906e *R/plot_entropy.R
90181cd642b4c2454a7a22844753e393 *R/plot_time.R
5d7f8b2be69fc52e372043a669a2f3ee *R/plot_worldmap.R
6826350d239eabac61b6a3dca78dba0f *R/sample_data.R
eb940f3b50acc8ab43643fdba62ce5f1 *README.md
62b66209c063aa851aedb5ad64fbc7d4 *data/JSON_sample.rda
a6121ed85f0ba2e024bfc633cf3174cd *data/metadata.rda
2679e37f609f50c645eb12ab0735feb1 *data/protein_2hosts.rda
a85ebef45d53feaa71932f4126c88937 *data/proteins_1host.rda
498491b0c5a756e5994f5ffba188f9d5 *inst/extdata/GISAID_EpiCoV.faa
186c67564ef6930f789b346c06413f45 *inst/extdata/NCBI_Protein.faa
13b1844eacc843d0ff7b74f83c6360de *inst/extdata/city_mapper.csv
8da75a81de31885d7037d20adc8b4fbe *man/JSON_sample.Rd
ad6d43cd4ef667f204765123edba525d *man/concat_conserved_kmer.Rd
5084e7481193869e079faa907b0972a0 *man/extract_from_GISAID.Rd
a79d958b82d0b0b21a0010315b9906a2 *man/extract_from_NCBI.Rd
bc8f755b926f2543f400dd8bfa502ca4 *man/figures/vdiver_overview_chart.png
452f52300a9e828878946a90f6d9943c *man/json2csv.Rd
6bb0a0f512ce87d82442e25e313e3b1a *man/metadata.Rd
895af6915ef8604b275f87a70974e46e *man/metadata_extraction.Rd
f28758d4181cd0d452b2750a80e057e8 *man/plot_conservationLevel.Rd
4db6b5991780edec0953efd51525328d *man/plot_correlation.Rd
45bec6ef02f4193f9a871a89236e23ee *man/plot_dynamics_protein.Rd
b2cda4e73bf77dee4cd50955a8b2b719 *man/plot_dynamics_proteome.Rd
2ee2298fa4410ac7f1e3b993002aea74 *man/plot_entropy.Rd
11dbdff41905d8a4ddeca228fac6438b *man/plot_time.Rd
456b8dd28e94fcb26d3e114c3be2bf13 *man/plot_worldmap.Rd
7bb89f9fa8ef22647479c0dc7739fffd *man/protein_2hosts.Rd
b94c00bf15d275320595e0de5c24f094 *man/proteins_1host.Rd
a0f41c3fa78837a65c705bfdc0750218 *man/vDiveR-package.Rd
dddfad8b6444fedb6cd81255a91e9755 *tests/testthat.R
ae747be12da0311254f004c19d864914 *tests/testthat/test-concat-seq.R
8f6bb504d2c1d5e0e35e6869cb1b7a0b *tests/testthat/test-json2csv.R
