ab516f092b2c29c1bb56ebc1e0c160b5 *DESCRIPTION
27ceee532f58b5dc94d6156dc20f1960 *NAMESPACE
e1857a9ced07c5195e029e0453ff4b2f *NEWS
ecc32d79c008addf6e94ebbd80a46b40 *R/AIC.R
4d43659a8aaf200f3135f872158f313e *R/CV.R
e37e2153beeb117eeb9f1bb41d9633c0 *R/ClosedN.R
69ec758514c5df76fb5be67b1ca12937 *R/D.designdata.R
0aec7f7ccbba26d046ad487e8846a2cd *R/DA.R
04f04c60ed300c811b50fc31e1b8aac2 *R/DENSITY.R
86faf6abac0b62c9a7070cc13cff24ce *R/Dsurface.R
cb98b2786f9a8f64e26c4a904b663f2b *R/LLsurface.secr.R
9b1359cab4d0d329016ba58af5741521 *R/LRtest.R
0a712ef28271e1c53c9d450d76380981 *R/PG.R
f820e403eb011558d5bb94fb37ec4e67 *R/RMarkInput.R
a6878f89d41d5f2a6f79163ffaa371e6 *R/Rsurface.R
ca8701b0780572c7a31b3d3ab323167f *R/SPACECAP.R
b0a57145610895aba8072322fa6c13f4 *R/addCovariates.R
c615f7c00a4f98826505e83f6a939403 *R/addSightings.R
5e608d82c480be753a59f6a6004560ce *R/addTelemetry.R
24449367cd0070c90f233017ce2b5e79 *R/as.data.frame.R
9274f45588ef8c7c2955b7fa3113e0e6 *R/autoini.R
c0ac1c9fc0431d522071ea07bbc33283 *R/circular.R
f9c5c75eb7e89eca83117ee793c5bb83 *R/clone.R
8597853c09e476c00ec280b0123611d6 *R/closure.R
5df3bf10e34c0f7d9986d91a45eeefe8 *R/confint.secr.R
ea44f5e650f0a31fd7947aaddfe678b8 *R/derivedMS.R
9682107584a4be605d13dd128ec22b12 *R/deviance.R
21a853f42274cbae2795d7eb6721026a *R/discretize.R
ea723778645c14b0e674296976f12df7 *R/ellipse.secr.R
4315b66e5900c76dd064e360aa68ab17 *R/empirical.R
d59d1cc7152be3291d75db38826a09ee *R/esa.R
11709dc6ec8664e6184ac27cf7d4f79b *R/fxi.R
6ccbfa943900d42f12666eebac65b001 *R/head.R
7b85f2d48fad768ebff131bea772179c *R/homerange.R
03a0eb5f946734f14623a25232232593 *R/ip.secr.R
325346ed3e5dfc75e2db85be58c80fa1 *R/join.R
aaebb2454c41efcc80fc5caaee31e244 *R/logmultinom.R
445886a65ef1f7b72202702e46e2c8a9 *R/make.capthist.R
382b307f195e8cd3f53b29a3ff2bb5e8 *R/make.grid.R
621d28c5516bc2c4a0e02cce191602f1 *R/make.mask.R
d1d0d3cc1c4dbeb830d86c64262f4ebe *R/make.tri.R
04d58e00e6d7cbf1f7748a40c710b51c *R/mash.r
70446dcccbde4c1c68c3e26cc2df2bc5 *R/mask.check.R
78c7866922f558d00008367ad5867c7a *R/methods.R
371d44ce7cf21527737fcd166427f28a *R/model.average.R
884e94af0003820c533dc0277d67925d *R/onAttach.R
a8f0cd3e42489460d75f33e4459f32b0 *R/par.secr.fit.R
7ee3e9033d0e9123336758cf7ee8881c *R/pdot.R
453d9b67e1d32b82742f10d78a69ba3b *R/plot.capthist.r
c8692d00755b02137f92625822e71d69 *R/plot.mask.r
f9c5437a8285068e4f8a470058bb9e4e *R/plot.popn.R
432f0ada7ed5a2b7c642d85d58e397a4 *R/plot.secr.R
774753708fdef241c065a7e0a1f9d5f8 *R/plot.traps.R
9db8ced95cafa9ed1969733aeb909100 *R/plotMaskEdge.R
fe3adcd6431586c58f855b39cc10f435 *R/pmixProfileLL.R
eb915010110e325e49e456532e45cb65 *R/predict.secr.R
4b5ff9f3bef8ea2be9a9da705f65ec76 *R/randomHabitat.R
bf720f1be51b12d8ca8d218a8a702943 *R/raster.R
47c351eca4641eb2e765f3a9c7816a24 *R/rbind.capthist.R
924f94b63d1397a8c237613597e80305 *R/rbind.mask.R
755c12da39ec1fe65b5d42d86bc71d27 *R/rbind.popn.R
996a42275fdd1405c9306fda3abea78d *R/rbind.traps.R
f9a47cdaf59ff2fb15d96074129e545a *R/read.traps.R
ca1cff72e27215575eb2c2fd95853f0d *R/reduce.R
288b1cab5c192dc23292832af046162e *R/regionN.R
67b68b76c04056d2a2fe5a5e0a24169d *R/score.test.R
a2e565055cc3a721166b20503cb70275 *R/secr.design.MS.R
f8c2045edc2af64b01b029972e52c74a *R/secr.fit.R
dfaf1e45e858ef2a43d53ee3ce06f1bc *R/secr.make.newdata.R
fa35cf216e7db5f7e84a5c44775dd300 *R/secr.test.R
5c5f7f31ebc07b6d844177a8f35ac293 *R/secrloglik.R
6aaff51b35953b44fb147e7a1b58070d *R/sighting.chat.R
bb55934b5d180ccf94e8883be682e312 *R/sim.capthist.R
288c7e5b075fa1fedd331418ac39a9fc *R/sim.popn.R
6c17b134862863b1aa97d20f5e55bff1 *R/sim.secr.R
b4d4da8e0f9517c4c047ca7bb4479e97 *R/snip.R
773cb9c74702b6aa378a1b2f21b776d1 *R/split.capthist.R
bb943b9b06e970c6e41bef0ef0e7fa51 *R/split.traps.R
357b230b3df90b41e65597d4c69a313e *R/suggest.buffer.R
a0f95f6276840e543eb74027cc572732 *R/superN.R
83118686414a7a25ea1604339fb779a3 *R/telemetry.R
b56144c20b2c07dfe477d5ab4223e9a3 *R/trap.builder.R
fce1c1b883db0d3dd1c286f70913a0b9 *R/usagePlot.R
1dd068a1ddcf31aed1f4a7d72cf5c4ef *R/utility.R
e9c556a50e1a9062bf23e953158f1ecb *R/verify.R
0bb65edf57a08ebd0cce13c4c15edcd7 *R/write.captures.R
fbc0da95fcdb433fbeb437bfa8907605 *R/write.traps.R
46d07cc31ba70780b83f41e404c5098f *R/writeGPS.R
e19eaafd01dfd4b33835fd0e4788b6a7 *build/vignette.rds
4a974951cc42f55af7e921617a486053 *data/OVpossum.RData
a7745d782e78ade2133bfbc5f0064054 *data/deermouse.RData
fae0083c69adf790dd389a429dee615a *data/hornedlizard.RData
9fe021ff08879400b73d3efe9373a1ad *data/housemouse.RData
173def377230984172acdc8f9b63ede8 *data/ovenbird.RData
ab2f2732dc18fef8d0dd10d3df215632 *data/ovensong.RData
a70ca73abcc291464846635c696579df *data/possum.RData
758ccc646c7cb890ca47acb2e92af79f *data/secrdemo.RData
b7cb20faa21d9e3e36fbb4205a52ca9d *data/skink.RData
f74f8c91a00fdb9a3987497f1c1f5d6d *data/stoatDNA.RData
7d4eb9eb0dd4d40bcf8575769948c393 *inst/CITATION
4d17fabb1bf1d9d58c011095fd2bad98 *inst/doc/index.html
841b0350de80676ff8a7a2103dec1f36 *inst/doc/secr-datainput.R
101a670f164fa991fdf5b5d0b16e8113 *inst/doc/secr-datainput.Rmd
3ce77f7a862f75197702e146c889d43c *inst/doc/secr-datainput.pdf
01fb602e477329c44f80c3051f7205c9 *inst/doc/secr-manual.pdf
79403a9b492e86f13c75be17080f662c *inst/doc/secr-overview.R
d33a6577339666da9c4945cfa503bc0b *inst/doc/secr-overview.Rmd
481a4cab765c6e405db558b3704b1a9e *inst/doc/secr-overview.pdf
bad38bfcb5f04e8dde8bd7ee982935d2 *inst/extdata/OVforest.dbf
17a3b48ebb0e2b4c7f84ebec9fc881d1 *inst/extdata/OVforest.shp
326230b0c0a8e4460e80c7f9ab972202 *inst/extdata/OVforest.shx
0e2db25a0282523d1b5ad9766573de14 *inst/extdata/capt.txt
6c5249149a7ca9c6c74c61e46abf36ff *inst/extdata/leftbank.txt
256d92123ea78cc2e7d7336cd58b52c8 *inst/extdata/lizarddata.R
b4273bcee4ad31c98108d391c0bc1e6e *inst/extdata/possumarea.dbf
1303bf739a47be7ac224a17e0d05478b *inst/extdata/possumarea.shp
7f714cae8ecdc41fcbba959a9b1f748b *inst/extdata/possumarea.shx
5ee72ae0960fb52e02aac8c6d6ce8725 *inst/extdata/possumarea.txt
11fa050458df9c40515873f8168dbfc0 *inst/extdata/stoat.xlsx
42901cd77df106e12b773949f546fea4 *inst/extdata/stoatcapt.txt
94ce4396d306c3ec3688842d54f53141 *inst/extdata/stoattrap.txt
7c5dd9832c15ad16f961e7f7471dc5b5 *inst/extdata/trap.txt
0c18dd9d598a1e04114003f1e8d0d3c3 *man/AIC.secr.Rd
b83d48a28a8a4b709aae8e0dc4937667 *man/CV.Rd
27f18148a644a57c90370e7a6e17c8b8 *man/D.designdata.Rd
19ba3c6eef7d02eda23c322f44d068a5 *man/DA.Rd
dbf5a5babe23cce7adc43a0063d88082 *man/DENSITY.Rd
39a94216c874112d21c60d4f276ccfcf *man/Dsurface.Rd
69cd3786de2e5be213d373814263574a *man/FAQ.Rd
7413e46503d3eff607ca9bc7f147a262 *man/LLsurface.Rd
ea8e6b5a6e17db32376c3cdc06f0a14e *man/LRtest.Rd
39559ed5cf2fbbe7b7f262e18924fe79 *man/OVpossum.Rd
1027e33267784b1e48c80470d9904472 *man/PG.Rd
eb4e4d8c53829a595bc38ddaa70e2dc7 *man/Parallel.Rd
e536f9745f4cc4bdea410729a1380d02 *man/RMarkInput.Rd
6c67fec9d08f7423513bd357ed8c1ef6 *man/Rsurface.Rd
e964d86e47c51dc12cb67e3f95860f7d *man/SPACECAP.Rd
3b639e01308fa4f107651496e2269d57 *man/addCovariates.Rd
b19b689f3f89d65ac740bceac0ef2653 *man/addSightings.Rd
cdd095bba37cf12fddc66d4960a84155 *man/addTelemetry.Rd
6628ad63dfc92093035b749b651d84de *man/as.data.frame.Rd
f4149db5ff1fc7255715baed59a1f1e6 *man/as.mask.Rd
b5a254a200c3f80f685ebd44fbdbd38d *man/autoini.Rd
ae2f533e8ed3225359dbd2dd6f4f3640 *man/capthist.Rd
91652679eb57722b919632d5301e9c49 *man/capthistfn.Rd
25664ea7e06ae181e1c1074e690c14cb *man/circular.Rd
bb92b13f1236d8fce07c5b48c744e34c *man/clone.Rd
4ec255c6918652bbbc508fecaf40386f *man/closedN.Rd
e028a02c7837d74cad7eec9009859aab *man/closure.Rd
cc5fe1adfe32ed64c44e1a2e7770ea91 *man/cluster.Rd
7a956de3d1762f6aa70607a3ed3f5b5e *man/coef.secr.Rd
c434ad31ef8b3c12acf41c8a25f1cc4a *man/confint.secr.Rd
81e5d25cec775b17b169aae46230d663 *man/contour.Rd
325c5009a7e7a37c53418d021e3ecd2d *man/coulombe.Rd
e02c107c3ba662b315fa047ad9bd1797 *man/covariates.Rd
907343bb2483cd4dabd82f66a8c7bb18 *man/deermouse.Rd
c6b95845110b55b839e17e2287111ad9 *man/deletemaskpoints.Rd
6ee6f73e3b23ca83067d3e0f18a27312 *man/derivedMS.Rd
a602646bc23198558d4d39638d466dd1 *man/details.Rd
1e290ea5427f2eda032c2538f8c44550 *man/detectfn.Rd
88c7c20c51f9485d6dad2d87e332b638 *man/detector.Rd
d965234e8a3f1a306951e23e99eee092 *man/deviance.secr.Rd
1d9954348556be0cfc9244f94f1ac372 *man/discretize.Rd
491a649761ae1d08efb1daa25323822e *man/distancetotrap.Rd
2a3de11c3adaab2784e352dc053873cd *man/ellipse.secr.Rd
067b3e22e8fa79edecdea49013475496 *man/empirical.Rd
da0a89f3ec499d3712aa274c2d4d65b6 *man/esaplot.Rd
d0473faa78c3fd399e308ad1069212e3 *man/esaplotsecr.Rd
83f4d65d69090c1b57937d722a883d49 *man/expected.n.Rd
b3185b9016c77feb89c635b6a8417f85 *man/fx.total.Rd
34c7e612cfd6b4dc569f30e22886047a *man/fxi.Rd
dfa0913f9cc46b37056c1523ce575fef *man/hcov.Rd
9023f5596658ed2b745a8da21ff0f70f *man/head.Rd
72fb6eb0a1aae9ca4c6a20b043198945 *man/homerange.Rd
b1e7173e075f5327b07625cd8e36f9f2 *man/hornedlizard.Rd
af654d6c9343a731957dac8485e903c8 *man/ip.secr.Rd
764d0d009bd57f0d2cdda74979548ac8 *man/join.Rd
7f67269e3569b9ff50a4aeb23fa1361f *man/logit.Rd
0cb384f04b882345c95d12aa7034000b *man/logmultinom.Rd
c6fb8b3c47d0e58e9082979e84fbf546 *man/make.capthist.Rd
e62769c8e3df17a6fc9f1e83e67db45b *man/make.mask.Rd
f0413a7c653f989a3986645ccdd27629 *man/make.systematic.Rd
c32f421bdbf4494ea1b4a65ebdb5ad10 *man/make.traps.Rd
19313b2b8aaea0a35427a7e1df766c4f *man/make.tri.Rd
b0d7ae673a17cecf9ab4847f0c73ad0d *man/manip.Rd
9ef603b828a67c8129e944ee1a8c37fe *man/mask.Rd
c09434568a1a8a2b076c57d35320274a *man/mask.check.Rd
0f20c9c933cb8b97faaaad72aca02c96 *man/model.average.Rd
5c48010b48ada3702a1bc41749637b99 *man/ms.Rd
59f6c6c1d8c9bff950106f95ace628d2 *man/occasionKey.Rd
f06c747ddf0053f2c8adddf2ef2e931f *man/ovenbird.Rd
b84d386f4473e97afb36ec4a708ccacb *man/ovensong.Rd
159975536da7f29ffff87b352edf7015 *man/par.secr.fit.Rd
510798c2a1fc44befa267750c29b48ff *man/pdot.Rd
10b31f2617c90595a4f10657f77ffe7c *man/plot.capthist.Rd
16852ba218baf658871aadeb2b8a48bc *man/plot.mask.Rd
85a83a96d37113c292195e23c72bec58 *man/plot.popn.Rd
185fe61d2705b836a01181a7ce785adc *man/plot.secr.Rd
d9a05c56ac7fadca06a60f87f9c3e98d *man/plot.traps.Rd
7bc5f33354b434c89c9df3989032f075 *man/plotmaskedge.Rd
30ed840f4639e21720c19c35b6b24942 *man/pmixProfileLL.Rd
756f64eb12ae48baf24ef8b86f4876b4 *man/pointsInPolygon.Rd
50ecdf0e28f561460a63463572c91819 *man/polyarea.Rd
6d5b2411f99d4e65d34716ea26822d04 *man/popn.Rd
76f71d26aa05d204b899423c1a485879 *man/possum.Rd
cf34e21a83e9f5d8da61d94d8b6359ec *man/predict.secr.Rd
c69cc74d3c6da03ae146739cd768ce91 *man/predictDsurface.Rd
15f8db092231825ce84269cb5f2b5acc *man/print.capthist.Rd
5dbe2d5c76dba17f7c4a64f77208e07c *man/print.secr.Rd
81aa3f7acf65fedd92f5bdfa539900d8 *man/print.traps.Rd
b3838309c4de1d9cf84651f3db8ba4be *man/randomHabitat.Rd
2eefabf550a7b264452c4b399a4f8095 *man/raster2.Rd
3a6a24d2f78a76db19bb35405ea2f0bc *man/rbind.capthist.Rd
27000acdc138786609689288272f2702 *man/rbind.popn.Rd
576a1ab73a8bcb4fb688458b8b9ff5ab *man/rbind.traps.Rd
bcd79efeaebb65f6729edc66fd64ebd2 *man/read.mask.Rd
18655b704a382b18c02bc58e040e9675 *man/read.telemetry.Rd
d3bee3238e68acf68216a232c45dade7 *man/read.traps.Rd
b94b8a89ac2fb9d60d2e703bbe8ae86d *man/rectangularMask.Rd
36d8d6baed1e9ffd1d1587c6760debb8 *man/reduce.Rd
bb712e39e843ee3aae63229ad0bc7c45 *man/reduce.capthist.Rd
27bde7ffd97934e4a8a44bb3cc37d9b2 *man/region.N.Rd
df2a8c97b791cf5f74fcebb62d5f0fff *man/score.test.Rd
d51a325dd4f203cfc819eb6b322b255c *man/secr-package.Rd
2283a9ed4922dbea96f3cb6701418998 *man/secr.design.MS.Rd
e207fb4cd5ef751c009284863f63d84c *man/secr.fit.Rd
b6ce356ea6ec60461db709a11d275440 *man/secr.make.newdata.Rd
f0f552524c797022d7803f530c17d645 *man/secr.test.Rd
68a08a21e1e036f63bcbcd5ec9c8abcd *man/secrRNG.Rd
1e441fbe4a7db6c9e9f5a75cd4857bdd *man/secrdemo.Rd
6d4868cdc294470a190b75ab9ad568cb *man/secrtest.Rd
a0b52acd5d834b9f0acc5ff38a414dfe *man/session.Rd
9bd2f5a9caeb1569143f637719679334 *man/sharefactorlevels.Rd
8e4f0b4f3eeeca67d7aa262b9faa2a8b *man/sighting.Rd
6a2df700037c9ff2e193965e4144af49 *man/signal.Rd
88975ae9d395c6a35a55f00310e19fa6 *man/signalmatrix.Rd
f8809e4d6f0fd4a69e856397a646c8ee *man/sim.capthist.Rd
b26d558566e5a7c139c06884c78b0257 *man/sim.popn.Rd
4651113d285be72425e5ad233114c6a2 *man/sim.secr.Rd
acf9792e86e27fd1ee351daef6f1e166 *man/skink.Rd
65aeca7a18edc9154ce825822040b663 *man/smooths.Rd
2ad5940527b06aec292462894caf9d64 *man/snip.Rd
0448945181ae6cdeaad3f25f22967830 *man/sort.Rd
78d9cf0a5f60bf099b63d0802ee47eec *man/spacing.Rd
e27b563808946d4006ed5f85eb42cf68 *man/speed.Rd
c0a28078795c7f0f13d9d6af08a62911 *man/stoatDNA.Rd
8c48d196fad3056e4f2c5c18c68e04c8 *man/strip.legend.Rd
5a658144a1193812edd0c424ac0b8dbe *man/subset.capthist.Rd
963fecda8ebc53e807b9adc8c2bf0091 *man/subset.mask.Rd
7e23927333d16ff45c1db844ae15d41b *man/subset.popn.Rd
e0537b82a8f4870cca7775c1c725d8ab *man/subset.traps.Rd
f9a0e0506142cf04f54d9630ccd93584 *man/suggest.buffer.Rd
3621464ac7ae0bb46f98d1e7515b45d6 *man/summary.capthist.Rd
e3ff94e55f0c806643722ae1e0499118 *man/summary.mask.Rd
d1c0469f727c583dcd8d6856facab3fb *man/summary.traps.Rd
d9d0a2c469a3ae5eda39443ba32bd78c *man/timevaryingcov.Rd
44ad9515046d8562a5ece5a2ad53573c *man/transformations.Rd
c2233495c05617724497d25f85010f5c *man/trap.builder.Rd
bcb108e06ec33b440b4ab59eb1f4d59e *man/traps.Rd
9823094769592629e990e01afd42cee2 *man/trapsfn.Rd
f6d53ba0287e2d3af2d1843096cb6446 *man/trim.Rd
96c573071e8aed4b125d9f4fdb88d360 *man/troubleshooting.Rd
3983d388781a7007d3a83729186d2816 *man/turnover.Rd
5c08ca915eb38e76ec6a84e889474f5e *man/updateCH.Rd
2687d6acd73e6dffcdfa11e9898cd8df *man/usage.Rd
cbe57aaef6daf88daf64b33150422797 *man/usagePlot.Rd
cd3e16e5fe5034509f21fef347c43371 *man/userdist.Rd
5f19e97659af724294a034c40a071724 *man/utility.Rd
be4b002b87f57aadc4f96c7c11960633 *man/vcov.secr.Rd
d910eeb646d094e7b6a1118d2602a9a5 *man/verify.Rd
99033ca57da0abba519f27c7e62370b0 *man/write.Rd
4f2ca054ce5f9636240f0cd9131183fc *man/writeGPS.Rd
6ee3d34d52fd49546cd88b4c2b0b5f89 *src/detectfn.c
de9b4454134bb4aea7391b9ad07c2165 *src/init.c
81531660f6389c7ef568cae76af40d06 *src/polygon.c
e851b2ad509b3ad992078102a853636a *src/secr.c
a40bdf0e47773945fa993e2f04818580 *src/secr.h
72b0be3e13b1a464da782aca0674b086 *src/sighting.c
21a667e8f647b4ac25be11328ea2362a *src/simsecr.c
17d041c09735b2b00eb254f83faaf57c *src/trapping.c
4949a123651e4b54c1159d209a1de96e *src/unmarked.c
33657cf3d26132d714c6af78c3bd3485 *src/utils.c
0e2db25a0282523d1b5ad9766573de14 *vignettes/capt.txt
438b8e4e8af9ef2d8680106166ede7d8 *vignettes/schematic3.png
101a670f164fa991fdf5b5d0b16e8113 *vignettes/secr-datainput.Rmd
d33a6577339666da9c4945cfa503bc0b *vignettes/secr-overview.Rmd
d67c12fc917c760559fe68c9c72d296b *vignettes/simpoly.png
7c5dd9832c15ad16f961e7f7471dc5b5 *vignettes/trap.txt
