c460517ff8c3020244e6e94197b5a792 *ChangeLog
5bc4b8e27a8b331ba9a6887a24e9e725 *DESCRIPTION
ba68affc323cb18703bb8ce285ddc6c3 *NAMESPACE
b956b3f09eb8e3d1cac53a40fae607f3 *NEWS.md
fe6538df6d5986f08a80b06008d303eb *R/MatrixExp.R
804d3c05e8871b43b42ab7c9eec4e683 *R/boot.R
195856200de56a64f8e3edc91c2b4bcd *R/constants.R
6576b076ade0bcc5898ba43f111a9eb0 *R/datasets_doc.R
9ecab1073a44633a5e4c5e6de779cd6b *R/deltamethod.R
a08dd2901a339ab646c19e1aca5f9600 *R/draic.R
4b2dd9e0ac2f2e2184234198784885f0 *R/efpt.R
26d7c5c7a18aea3205b5deae2c974ebe *R/hmm-dists.R
13a9c790db5c2a9a1d99f4fd4c9d7682 *R/hmm.R
86b8594428fd449f22a8000c3c9843ba *R/hmodel2list.R
b9d1f85b1a9dd9576957f71f92e41331 *R/internals_doc.R
bbb47f9ac55e99da25b98a2beb994917 *R/medists.R
385a5afaed084d25a47eefbd266a5cec *R/msm-package.R
1a1a8decb521ac092f81cfbefa665333 *R/msm.R
1d480b306cb40db15ca3775896e8bd47 *R/mstate.R
571f18753afb0509b3a4ceb6785f77b7 *R/olddata.R
83f719dabd7e192a7c32129a62c466a2 *R/optim.R
ade4dccbfe5064a2f1bbfa5528c2e3c8 *R/outputs.R
0db922267cab1c50a28ea28e1812f87d *R/pearson.R
2e0945cb46b3b01252f810cbd6b53c0b *R/pexp.R
167b7c6fbf38b3422d8d90eea22c419b *R/phase.R
61688d877055719744e5b235f4561c04 *R/plot.R
feaee3c1951399a4e0d3c90d52fd05a1 *R/ppass.R
a4448a7eefa8ad133d15ca0739c9f100 *R/prevalence.R
a7f4c205027719da9ee0a923dbe5611c *R/print.R
eeaa4f3318e19923de36453293122379 *R/qgeneric.R
caa401192f3b4c7970a3f13459f0a81a *R/scoreresid.R
360f9a2eebedabf9334dbb311ebeccfe *R/simul.R
04baad7340cde7406455f4773eaa3b11 *R/summary.R
9a08105c5d3e245f589e7fd9ab881d1c *R/tidy.R
1a66ee18778a0c1fc8517e82218a6a45 *R/tnorm.R
9e96194ff444d83260e430c2c00757cc *R/totlos.R
9fdf10e329189a10900c3e422b0158e5 *R/utils.R
b6457d18b1d4dfb79a53619bbd329664 *R/viterbi.R
781171cc53a5c873fcdc8b6168009d00 *build/vignette.rds
2e83efb31c764734aa67ed4e686c7fc1 *data/bos3.rda
21080bd2b47eb8885142701c92c14c73 *data/bos4.rda
35ea8ffa25baf02ee38f4ccb5fdc0446 *data/msmdata.rda
06e7302ddafa6ae8bfa42e939b85d471 *inst/CITATION
2966ec2a2cadc89a000931d448391350 *inst/NEWS
c6f3ba1f30060fa77a0c818724d9581d *inst/doc/msm-manual.R
268e2df5718977ebab0977db5378ccfe *inst/doc/msm-manual.Rnw
7567f6f1cb8c66da47ba61dd463334f1 *inst/doc/msm-manual.pdf
ca2b9d76ae4df2b4f1adef54f7053fb7 *man/MatrixExp.Rd
19ba7f5fa9359a7000e43475b3263ba8 *man/aneur.Rd
f4dd5dd30b7ae85b4ea0ca78611c17cb *man/boot.msm.Rd
e7907155ffc75a9faf6a373470136c9f *man/bos.Rd
02d24561533028332418d37073774af0 *man/cav.Rd
8bc7f5712686b151b8f4dcf47e10b767 *man/cmodel.object.Rd
5dc3f3dbefbf2f9d7b8a19308cc3af7d *man/coef.msm.Rd
eaa82462d84ece5dd38a97aac043aafe *man/crudeinits.msm.Rd
a12f8ac8ee230e6d5afe8528622bf81f *man/deltamethod.Rd
ba092d092755c1de260ac5e5b3868507 *man/draic.msm.Rd
3056e9823647e58e1812106031644b2e *man/ecmodel.object.Rd
28402a2aeb52afb849b71dfa0984a001 *man/efpt.msm.Rd
cf0da56cb6e6f1f9cf2e96274fd1fa51 *man/ematrix.msm.Rd
85149777554455a68adbec7864d8ca8e *man/emodel.object.Rd
cf4bd366ea36544829820d09c232ad9e *man/fev.Rd
97cb47e80306f89ef440f84aebad3ba6 *man/hazard.msm.Rd
83c36ab2281352f06937afb740c03858 *man/hmm-dists.Rd
0727d813e72f07da04f71745db23e8c2 *man/hmmMV.Rd
1896f37dcf626b5959a569307f5bf664 *man/hmodel.object.Rd
7d1867d548ba869c1157191bca073237 *man/hmodel2list.Rd
a96b19c599d136c37bf4990ec867ba57 *man/logLik.msm.Rd
f79dc33f15f8191179ced2735fbeb24d *man/lrtest.msm.Rd
b2f75f121d8059ad424efefb9075d80e *man/medists.Rd
0e18d3398c098554fa2f53e9d4f865a5 *man/model.frame.msm.Rd
d23fdda7bd1cb3ae6b16c1a20d611ead *man/msm-package.Rd
3577acdb987abab747e81ba38881ee70 *man/msm.Rd
692d62427000a680f4e85a69ebfd7065 *man/msm.form.qoutput.Rd
30e8148739de058bba564518e2a479cc *man/msm.object.Rd
09bd2d87685ed25837a82a7122d7c281 *man/msm2Surv.Rd
8f8cb4958e1bac05cdd00f1f8844e286 *man/odds.msm.Rd
be47855ba7a8c62248dae1d5684bad6c *man/paramdata.object.Rd
b21cb14de84903225cfe73879d1bef18 *man/pearson.msm.Rd
6513034f0ba33b5f4d61c36da5510c7d *man/pexp.Rd
55e1c4c91a8a6d5b54ea186b9d773e5e *man/phasemeans.msm.Rd
3d24d0a22a6a1d7a23fd8b2423b114af *man/plot.msm.Rd
27c1cf9918583e3ee10968df789b981d *man/plot.prevalence.msm.Rd
9ef8af9bff16afd8b54009e553d79acb *man/plot.survfit.msm.Rd
9cf33082cba416e7327fef55ff58c3b5 *man/plotprog.msm.Rd
7a542520a88f454534605ee2bc3288ee *man/pmatrix.msm.Rd
b044bb485dc59811d3e310d9215bb48d *man/pmatrix.piecewise.msm.Rd
9cb1e95b823dd41fe81faff5ea8786b8 *man/pnext.msm.Rd
7939b3bf03adfb19fcbae5978f4a5251 *man/ppass.msm.Rd
aea2827cf02e7519831fca7d95a57124 *man/prevalence.msm.Rd
428ed0fd5118866be58879ef620841c1 *man/print.msm.Rd
cecf635205952247dac8c2f1824c9a3b *man/printold.msm.Rd
239f49812e60c74546605c27ff6a94ef *man/psor.Rd
a398b47e460223fddf20faa5e91a927e *man/qcmodel.object.Rd
40575b7f9c3ced3b2531b245606c2f36 *man/qgeneric.Rd
373485f5333dc08230e5c9285ea6457f *man/qmatrix.msm.Rd
25f47223ec14158d64b07474a01724ac *man/qmodel.object.Rd
9dae1e056c5a4c21395d4dcee7209eb0 *man/qratio.msm.Rd
800a46c91f4bc84da09ed2efd256b6dc *man/recreate.olddata.Rd
a95e72a29774e3af6d288b34b9745a25 *man/scoreresid.msm.Rd
c000e57607ad3b3ae8fc2c8d0539cda0 *man/sim.msm.Rd
d583cabc6e6c1799f3d308c0075a7c8c *man/simfitted.msm.Rd
3c6b0f2d22e296c57b055e4ceada1990 *man/simmulti.msm.Rd
e28c92b709a68a70e89b5d11f6cfff21 *man/sojourn.msm.Rd
d333a32e275eff0ba628671956667b1b *man/statetable.msm.Rd
39d1b657e072933c4e7051e3c5052f32 *man/summary.msm.Rd
b70b31a7f80e4443c30ed38d7f6d5b41 *man/surface.msm.Rd
a6febb155dcf68f64e56a0da74fcb520 *man/tidy.msm.Rd
b7180a2593cf94ee4a57641fb560a946 *man/tidy.msm.est.Rd
c4a04f6c4fcaeefb88558a5e187e94bd *man/tidy.msm.estbystate.Rd
a5054f6a625427b7e5608c3cbe23df3a *man/tidy.msm.prevalence.Rd
86b475056924d8b048d27afa579aaa47 *man/tnorm.Rd
d4514b299415116e2d57e64d8c5a0c74 *man/totlos.msm.Rd
8a0ccaa3140e2605ad2f7818851d1968 *man/transient.msm.Rd
013f38d2dd2ae26e461fb3b55f71d289 *man/twophase.Rd
facd9e11c5df7528e6021f3dd38b12c3 *man/updatepars.msm.Rd
1836ff84ce2a880ef1a9279f1464376e *man/viterbi.msm.Rd
619d13ce6900fca2139e2139408d39ad *src/Makevars
2054ebf3d8d6a436017347d05cd8f512 *src/analyticp.c
5ff6242e5b1d05358bab24dd3be8bccd *src/expm.h
7addf00a0875818aa1e78c9d3f5ff0a8 *src/hmm.c
082ac588d4bd343cd0676d01213a1e91 *src/hmm.h
40084d7909dfcf8a82c7e329e706d316 *src/hmmderiv.c
9ae2352a2da6924041a57e6ec609cc32 *src/lik.c
fee896c3be93271eb27bc40d85b8520f *src/msm-init.c
2887681d68abdf90ce7df7fa13e82843 *src/msm.h
6dd79e9b7c97b58c19c64ff2f92bf440 *src/pijt.c
7a2c53c3ce4c4dd37a62ef4dfcc35ce3 *tests/test_base.R
cd00af64ec331af182dafd74c77107f8 *tests/testthat/helper.r
e63e537aa0930b05fff245a23619ea07 *tests/testthat/test_analyticp.r
e2c81ab5ca5fc13977db33116a39dd2b *tests/testthat/test_boot.R
04f8c782394158413e836b845d4479a2 *tests/testthat/test_datasumm.r
ae716fa7b3ac8067ae614bb0a6f76866 *tests/testthat/test_deriv.r
937966194b0c4897040751a795709bfc *tests/testthat/test_draic.r
12f117aa64759bcd6f4ea82c292cc247 *tests/testthat/test_hmodel2list.R
816c9aa73c147b1c49bb2894c6c78f03 *tests/testthat/test_models.r
e500bed26455440902491d358566d54a *tests/testthat/test_models_hmm.r
5966c98916c1421e8bc2277b373bb289 *tests/testthat/test_models_hmmmulti.r
abe663b515b493b9485f195a147f25bd *tests/testthat/test_models_misc.r
e069a0dee4b17c02a6ecb377c01478f1 *tests/testthat/test_msm2Surv.R
bcc8e77b4055031ebe4d00b79e70de4a *tests/testthat/test_pearson.R
ab4b73a8d65d1c3cce2ca122bfa986a2 *tests/testthat/test_phase.R
45a06c42888ce5525282cd52207bc7b4 *tests/testthat/test_ppass.R
2d88c2ca5d88ff1be44e3bd73e8aee04 *tests/testthat/test_simul.R
b25cab5de6435014a6c5d6da501d41f7 *tests/testthat/test_tidy.R
2063dc77210f491c90f04c26865ae214 *tests/testthat/test_utils.r
ce824132995f8521b0054dc54992ae84 *tests/testthat/test_viterbi.R
b513402f9fe37f688cb186152e431854 *tests/testthat/test_weights.R
abf5c593f0f0d810b47aa8e8bf50999a *vignettes/Sweave-local.sty
e0052e8fc1fae86b46fd0aba280c5692 *vignettes/figures/dags/p2q1.odg
6f316449798c364e529b327f94f3e28f *vignettes/figures/dags/p2q1.pdf
2bcbdcf47e6974c3b548de41c465a7ee *vignettes/figures/dags/p2q1.ps
cd238727969774b0647a895c0211494f *vignettes/figures/dags/p2q12.odg
99d920032a621204386887c3633714b3 *vignettes/figures/dags/p2q12.pdf
3778109cb33481c0290b538e5ba9de56 *vignettes/figures/dags/p2q12.ps
eae87a29049543ec1a3ec2801ef3eae3 *vignettes/figures/dags/p3q12.odg
a66ba5ec09755d664674a71e263d1175 *vignettes/figures/dags/p3q12.pdf
d4e331d0f31dc43533366d2f41b9f26f *vignettes/figures/dags/p3q12.ps
6404bd1b7d0408c1b1ec45551000f43e *vignettes/figures/dags/p3q124.odg
a4d012a17281f0ccedd3467b9cd470ed *vignettes/figures/dags/p3q124.pdf
24c522cd83f8106d85adcc70affcdc4d *vignettes/figures/dags/p3q124.ps
f2159d3a9aa130e284abd09ff480bab4 *vignettes/figures/dags/p3q1246.odg
b73b4e87467382e9ff339027847e9325 *vignettes/figures/dags/p3q1246.pdf
8a8d3ff84fb77f83a38d4b0e771306bf *vignettes/figures/dags/p3q1246.ps
f5ea2548e172d6d93ef7bd3cdbbeb7d7 *vignettes/figures/dags/p3q135.odg
f0f7efaae9b19f153bd6bb6f08b2dbd1 *vignettes/figures/dags/p3q135.pdf
d17d4b05b60c2ea687a2184fdb8b9fe6 *vignettes/figures/dags/p3q135.ps
fba3e0895db0bd7f169a890ad03287b6 *vignettes/figures/dags/p3q14.odg
50dee61bda0c6b1d8514fda04f64e9e2 *vignettes/figures/dags/p3q14.pdf
42dc346ef9a84eb555f109eca6ab253c *vignettes/figures/dags/p3q14.ps
240b6e76d6d8f46eb940fb3a37133849 *vignettes/figures/dags/p3q16.odg
e1e57ad78e297d74968968bc77cff8fa *vignettes/figures/dags/p3q16.pdf
f3bd67b551c8f333531fd972e5f5e9b3 *vignettes/figures/dags/p3q16.ps
58e91c96d35338e07a026d0c63ea2dea *vignettes/figures/dags/p4q13569.odg
93d11351873b96458bd32af02ee81b98 *vignettes/figures/dags/p4q13569.pdf
7352324901bcf719815e028e70d35e0e *vignettes/figures/dags/p4q13569.ps
39afd3f1bee833a8cbb491014a844386 *vignettes/figures/dags/p4q159.odg
7e8e8019849d1d5b0618206da5b62138 *vignettes/figures/dags/p4q159.pdf
fd243cfa8f962f195c74977c9cc710f0 *vignettes/figures/dags/p4q159.ps
8310504068e4a60514cdc55155f2089e *vignettes/figures/dags/p5q1_4_6_8_11_12_16.odg
f56ba00423a56c860f50fd744102b66b *vignettes/figures/dags/p5q1_4_6_8_11_12_16.pdf
2f9617b50cb64d6c5a33a84fc1874430 *vignettes/figures/dags/p5q1_4_6_8_11_12_16.ps
79269e8048c339d5b68b4d04f77502a6 *vignettes/figures/dags/p5q1_6_11_16.odg
1f46c751b525d843cbcac57e25e104a6 *vignettes/figures/dags/p5q1_6_11_16.pdf
d3eb1119555c563bfbd434d6c1b6ad44 *vignettes/figures/dags/p5q1_6_11_16.ps
f51e573e1ee0416774241ab15065ba25 *vignettes/figures/dags/p5q1_6_7_11_12.odg
4b90822210633b471edcadc410258f99 *vignettes/figures/dags/p5q1_6_7_11_12.pdf
9c4de94e3dce8d1adad3e08458e24766 *vignettes/figures/dags/p5q1_6_7_11_12.ps
3f41f9a36481dd33390cfaf81ee2ca5c *vignettes/figures/fev_viterbi.pdf
58492d16e59e4fbbaf6bec498afd436d *vignettes/figures/general.eps
e3889cf40ff59689f1a6cfac011c7115 *vignettes/figures/general.pdf
06f4bff6b071901d1120c7431193c59d *vignettes/figures/hidden.pdf
617de047188fd38e66a6bc687d449669 *vignettes/figures/hidden.ps
691da9f48c3e9592810c8d8b87337dc2 *vignettes/figures/illdeath.eps
af3adf546c0c77610b76919d15607a18 *vignettes/figures/illdeath.pdf
21b77d1ce79130c2ca239c0675f11e6e *vignettes/figures/multistate.eps
2d8ca6ab876fe50cf7bfee4724fdcbc3 *vignettes/figures/multistate.pdf
f700cbb68eb80b74cb0879ed2ca7fb04 *vignettes/figures/p2q1.eps
8ec73693aa663c3a367f7bd5ea663c7c *vignettes/figures/p2q1.pdf
0bf2f40965070379fd1e1b2632187194 *vignettes/figures/p2q12.eps
7f89c5f85f787b2b41c623cbf366d042 *vignettes/figures/p2q12.pdf
fe947efe77d0a5f76864fde47a41bf30 *vignettes/figures/p3q12.eps
04f638273c713543f6dad7c71778df07 *vignettes/figures/p3q12.pdf
3bd5bdd12fc5bca6317205fbc11be88d *vignettes/figures/p3q124.eps
98c0baea7a7468465b6d5fba30a62cfa *vignettes/figures/p3q124.pdf
d03d816972e4ed184f339da7e3096d88 *vignettes/figures/p3q1246.eps
634cc49ae5959dbfaab98007521e3150 *vignettes/figures/p3q1246.pdf
af7ec57beb1bc7307c342a4b7fc9abef *vignettes/figures/p3q135.eps
0ae4b74fa9984b26cdaf3a37ef0ec733 *vignettes/figures/p3q135.pdf
370378f12f9e8c20dc721a6117609aa0 *vignettes/figures/p3q14.eps
5178056951a81e36e697d91d6f655348 *vignettes/figures/p3q14.pdf
4893a2f5ddbcebb454debb76e23e354f *vignettes/figures/p3q16.eps
1d88c1377297306389a460a8a5598ff2 *vignettes/figures/p3q16.pdf
a153b95b87e76c38a19922d1af19fbda *vignettes/figures/p4q13569.eps
a54418b47ce58e6fa28c500af30d5566 *vignettes/figures/p4q13569.pdf
116a887d8a095a8e65f26cad5e7ed019 *vignettes/figures/p4q159.eps
0bbc74d48ecbcee9199ebea6811bf377 *vignettes/figures/p4q159.pdf
d4326b78b1bf427a26518702dcabc2ee *vignettes/figures/p5q1_4_6_8_11_12_16.eps
684cf4d5299dab735d4ddf4fdaedcca4 *vignettes/figures/p5q1_4_6_8_11_12_16.pdf
ec84497da69d66cce67b111baa86b8dc *vignettes/figures/p5q1_6_11_16.eps
3fa510d2be43accb7ce3cbbe125c93a5 *vignettes/figures/p5q1_6_11_16.pdf
963d4adc9b148996dce630c797d89dbb *vignettes/figures/p5q1_6_7_11_12.eps
2de6c2326f3031d048c31b507d6a2f20 *vignettes/figures/p5q1_6_7_11_12.pdf
2ea085b4ec235c4882c6a0958c9362a5 *vignettes/figures/sampling.pdf
338ee5ff690c41f8e65fcfe97b84a394 *vignettes/figures/sampling.ps
268e2df5718977ebab0977db5378ccfe *vignettes/msm-manual.Rnw
9ca7c43342d24a72789969e55f295ac0 *vignettes/msm.bib
