4844c0ebe510e9049bc5ecc85fce7dea *CHANGELOG
b095ff8806b566dd93cde4f3d1be13eb *DESCRIPTION
079855f82df9e4d6dab5578bac12341d *NAMESPACE
562c74df5ca5c69f3308f5868e2afc7a *R/FWright.landscape.R
0ecf4792f0ac266a28339c8e76885341 *R/Fst.landscape.R
461d4cc93b1f36cb0bf5b5dd4da7a9b3 *R/advance.landscape.R
ce3a8fc5fbf4c8b030c4c6a75e7884be *R/allelecount.landscape.R
d3d4c5fe461ffa3225f4ffcf024bbb04 *R/allelefreq.landscape.R
eac4f706116b0af90e31a556aaa6bd66 *R/amova.R
9400a8b046c4b34a80fd1049da32f2e6 *R/carry-stage.R
c5930bab2ff2e741dcf529f5360c68cc *R/carry.landscape.R
0c5b2aeff56a0cb715ada7233f85002f *R/create.progeny.landscape.R
3f6b7da502f57eea7721f79e46ec8b6f *R/demography.landscape.R
ace56b25ba3f0913297af7e5a36bbb01 *R/distance-functions.R
3720421ecb87182c90c3158039ea1d63 *R/dmixed.R
248e60e8c60ed27cd0c7a6797d18ab02 *R/exp.het.landscape.R
7fa5cbaedc40cc43268ffb6d44d32b2d *R/fdist.R
8af862c61ec10dd907f05c17f8b86e08 *R/genepopR.R
f6a60c0e6ce8a7787f761964cc9f55c5 *R/generatelocations.R
9ab51d7fdb94b43fb8f7441ba9f5b5ed *R/geneseq.R
d74d613e066da6dc963a2e6a68ed6f39 *R/indxfreq.R
ef3aff8f98e2d4df1f40580ddf35856e *R/is.landscape.R
38512b0de15169184463286ebd43e1db *R/is.nsquare.R
4685fd6f33fb4ff16970976a8430df11 *R/landscape.clean.R
0ed465e2cdb44f2f76b422bbc9f15241 *R/landscape.democol.R
da71126f6d36fd80960d6b69f7e4693d *R/landscape.extinct.R
3efa441dc01d6f386c17697dcbe22525 *R/landscape.kernel.demos.R
ca8b805c514f7a12751a49c5b21b1ee4 *R/landscape.kernel.plot.R
af1f3105f938af1c19de5f5bd8e6f232 *R/landscape.sample.R
b665a22396d06af43d7bb774d03327b4 *R/locus.R
56e2563a84543e234486593c13bfe06a *R/locusvec.R
6b8764da05c13f05c22795b84f68502f *R/makealleles.R
1e6e0164edc5a792634a191c28536b0d *R/mismatchdist.R
6c9d398c46e28b5ad744beb6aa4c89ce *R/mixed-dist-prob-functions.R
3d884e622b2682999b9baadfcc9672f6 *R/new.epoch.R
7c53b0ddce6e2ae180248a43b9bef6bd *R/new.example.landscape.R
a3924def5e4d6080c5047da030e8e7f1 *R/new.expression.R
85cb9c0f8c72a4804998a1b3e1312ff7 *R/new.floatparam.R
f9e309fd84b58098a766c6baefa3f870 *R/new.individuals.R
71933027174141c1062292e5c5bc0c96 *R/new.intparam.R
175d9d587172273cd464741efa9fbdaa *R/new.intparam.land.R
b4ca22a07f0382562f8caef64db1d033 *R/new.landscape.default.R
045c99e675ee8f778c949bd70ed2854f *R/new.landscape.empty.R
849305cc9fb4d9d8c8327033c7fd1735 *R/new.local.demo.R
18746ac328a8a573c96a60bad2d3d9f8 *R/new.locus.R
33c325ca586f7d0ba3a8cc7ef490deb3 *R/new.switchparam.land.R
e94963212f9a93bf459d42e1942d3a90 *R/obs.het.landscape.R
88cbc645f82a7552c0747419bcbd182a *R/phenotypes.R
151b90cdf02961ec8f0cacd397d4453d *R/ploidy.R
782521fff9ca66bf1d7e1bf75d3a575c *R/plot.landscape.locations.R
9096bee61e4622dec5ac895ebb806598 *R/plot.landscape.popsizedist.R
ee1b1d5e14e7fe8348c51547c2cccde4 *R/plot.landscape.progeny.R
6ed72303eb57391874776424de7fd173 *R/plot.landscape.stgsizedist.R
f4845e834084b99aedcd2d4342e2738a *R/populations.R
0c85c11fe0d79ec6cd3161e650fb9afc *R/read.landscape.R
303fd3c511032f1c8f36d31b0c2e6e78 *R/reproduce.landscape.R
f27592aa6af3d95f2cb2ecf6ff104035 *R/rm.lambda.R
bfa8ec594c24c3a5bdf8218c62907b5c *R/simcoal.R
66f1e8ded694893f40d2581cd1f88d91 *R/simulate.landscape.R
4bc5ef97c5479f91fa7b18e22c45f58d *R/states.R
1a733fecf3d7c1c0207bf184a0faf8e6 *R/survive.landscape.R
6ef87fe68aef95ff4e78ec503b53a756 *R/tajima.d.landscape.R
c7ec3d7398a9002f06647cdcba8a08b2 *R/test.landscape.function.R
0a7c7c81af21af7549f5cfddc3ea3a49 *R/theta.h.landscape.R
d8385eca72833927c94ae2b1343485e6 *R/theta.k.landscape.R
981bfdef9a49d7f1d664d0e5410e7368 *R/theta.s.landscape.R
8c0c9de48550306e864f6d0a5ff8b82e *R/typelookup.R
5188da0e225a4e7065e57935b2952a10 *R/utilities.R
36776a62244ca8d7337d4a70a6b4c08d *R/write.landscape.R
28e255e32988cebd78fc4ff8bc224726 *R/write.landscape.foreign.R
50941d130be38b13985134312eff81b7 *R/write.landscape.spagedi.R
7d56c646d2a07446c010f8c19e82cd96 *inst/doc/Makefile
dc78f4702398e948603284fdeab18142 *inst/doc/fdist/INTFILE_orig
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d4811da0f050557069bdda296c9e35cd *inst/doc/fdist/c-landscape.R
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a56184ebdfb71c09409fb298242a7482 *inst/doc/fdist/fdist_params2.dat.dist
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55d5d026e3202ea25b3691f882f1fccf *inst/doc/fdist/generatelocations.R
c473e1c12dafd42d91584f8e1422a6c5 *inst/doc/fdist/infile
fb7af7e26909146d2434471fd1b74c7c *inst/doc/fdist/intfile
bea10e69b9f3ad0bdc6e0fcf049f797f *inst/doc/fdist/iufro.R
3c015fed163a31789bd66bcd8afd38d1 *inst/doc/fdist/logfile
7c8976845086b15ec171fa4f10b3e947 *inst/doc/fdist/pdist.dat
f174792e17b0a16c83f96afe663361d8 *inst/doc/fdist/phi-st.pdf
f26a45aff79207ad07646f9ec4582cb2 *inst/doc/fdist/phist.rda
53b046da68953e5126ca1c27f99c8af3 *inst/doc/fdist/plot-results.R
dd2cb84b82a852a7a5f8c61b076dd7d4 *inst/doc/fdist/pvalue.out
7bc952846624dbae6a12862bf4228146 *inst/doc/fdist/pvalue2.out
30c9dd1ab5beb845ab87ed60f6b11bdb *inst/doc/fdist/simulate-fdist-spatial.R
a0fc72cbaee68b7a9d5f07c75f72ff42 *inst/doc/fdist/simulate-fdist-spatial.R.old
15bd07664b6dc515118d6c7a7630f758 *inst/doc/fdist/tail1-immrate.eps
346e9e37053b927e2c12c16c2b33b798 *inst/doc/fdist/tail2-box.eps
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cb97ee561fa35bc310f295c103ac0e44 *inst/doc/fdist/test-disp.R
b7432c1854860cd219726a6337d0faa2 *inst/doc/fdist/testout.dat
480df320b673d004333d5b43d725a4a8 *inst/doc/fdist/typeI-final.rda
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e7c744462c7921f2bbe3a80e7c685c30 *inst/doc/fdist/typeI-final2.rda
e3ee505cc3ef38f846837e450604cc8e *inst/doc/fdist/typeI-final3.rda
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15b38b7b8c9756b5fb8e47c025671cc0 *inst/doc/fdist/typeI.2.rda
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584beefdb513acf7b08d3196b0461dbb *inst/doc/kernelPop-intro.R
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0c8f47b135fbaec85a7f185dc8435692 *inst/doc/kernelPop-intro/Makefile
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c9bead67feeb2852a7956f94ca7a106f *inst/doc/kernelPop-intro/diploid-arlequin.arb
592b105ba3655bdbe6e7c17f44f002c8 *inst/doc/kernelPop-intro/genepop.out
bae18d27ba236f9a915f8aa6c6a212df *inst/doc/kernelPop-intro/infile
584beefdb513acf7b08d3196b0461dbb *inst/doc/kernelPop-intro/kernelPop-intro.R
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86b46ec858355a60a8c5c0aad1f09709 *inst/doc/kernelPop-intro/kernelPop-intro.tex
9f131cfd16b6192df891d59eb9da8ba7 *inst/doc/kernelPop-intro/landscape-object.pdf
94041390a5d4d85f5d25d90537db96d0 *inst/doc/kernelPop-intro/metamarkov.pdf
f74e40fc4c430d1cc6534b8e0cd855e2 *inst/doc/kernelPop-intro/migrate.infile
879c03dd5ac7ea88d739af7a52780bb5 *inst/doc/landscape-pollen.png
589adf5c01c0b4ee2d1ce3f5981afd81 *inst/doc/landscape-seed.png
d41d8cd98f00b204e9800998ecf8427e *inst/doc/test/Rplots.ps
2b83568ee5362cbf561906bf6e34adfa *inst/doc/test/distance-functions.R
2bf3f3afa8d076c0313346a046eb20a3 *inst/doc/test/landscape-kernels.R
0c2d5aeec0f491822093195ca2e829dc *inst/doc/test/pollen.kernel.R
7625466cf4001f683af21592d995dcaa *inst/doc/test/seed.kernel.R
ed70e0dd0af54f70783e9bd920990b48 *inst/doc/test/seed.kernel.stage.R
b68209c6dcef07609b1356f63babaa7e *man/SimulationComponents.Rd
6517482104e9c9ee84fecf7ee6ca209c *man/is.landscape.Rd
28491ea8571929767728023572e0e0f0 *man/landscape.FWright.Rd
059680a45bcb4738333a484e7216f20f *man/landscape.Fst.Rd
3a1ed53433b7fcdf4c7d65d220edc5d9 *man/landscape.allelecount.Rd
6514ed29b9f69cb9acf06213e1e142b7 *man/landscape.allelefreq.Rd
64d6842fc8713bf398e14dd3000d1ceb *man/landscape.amova.Rd
819d197fef5d72110f4141d16d018ec3 *man/landscape.amova.locus.Rd
39def4a0b0d5a51c57424b0e5a736fed *man/landscape.amova.pairwise.Rd
ff60e1624608ba7055901a71ecca00fd *man/landscape.clean.Rd
4bfa26ffaecbebe32e44f15aba02106f *man/landscape.coalinput.Rd
7c60bf95affa0356e4f04e2bebd7ab26 *man/landscape.democol.Rd
0e786bcb9359fc30c60167ef81c3e9ee *man/landscape.demography.Rd
eadcddc3a43eb8b43e1b2a5ed5342d1e *man/landscape.exp.het.Rd
9a8dc32f605a28dd7295c21b1111acba *man/landscape.genepop.output.Rd
b74018cc474426204511bfb6ea8a3cdd *man/landscape.generate.locations.Rd
fe7232bba9ad06b003b293b7ca354f0f *man/landscape.locus.Rd
14ef976e7673d7d262a043d74ca9b024 *man/landscape.locus.states.Rd
74e1b70bab1065bc2ac410299f57a2bb *man/landscape.locusvec.Rd
0a25b28fe76794db70b1f2b20c7dd1f1 *man/landscape.new.empty.Rd
9b6fc5dd117173183b2a15c7fff63047 *man/landscape.new.epoch.Rd
81892c98d533f460f4427754189aa29e *man/landscape.new.example.Rd
e3bc7a076998b9cfb39e7f8ed4d994f0 *man/landscape.new.expression.Rd
492f179654a83e830272cbe607a1678b *man/landscape.new.floatparam.Rd
5357638523ad25d39f0127924baca1ae *man/landscape.new.individuals.Rd
457bb6fa47a0d2044a15c232d933cb84 *man/landscape.new.intparam.Rd
d5db6b90e4004bf2da252c2d0dabcad7 *man/landscape.new.local.demo.Rd
952b1c9f26707ae2931ceb6dbe26f697 *man/landscape.new.locus.Rd
f039f834afe4b4c649d25512b366ef98 *man/landscape.new.switchparam.Rd
07215c4e0de0c096c8001533c6083b95 *man/landscape.obs.het.Rd
4bdcf0b5ecd5da14dc9853bbd684056a *man/landscape.ploidy.Rd
4f3d1c79cc74b553e9f7b1e9988e18ba *man/landscape.plot.locations.Rd
e2a33c588a23963d0ac2b96ecccbe9fb *man/landscape.pollen.kernel.demo.Rd
42d82c3e2363aa9089205c6fe223b0f5 *man/landscape.populations.Rd
955fbde3a7c85f752d9ef87ab197dbeb *man/landscape.sample.Rd
0610872fd5c49d649c721b184215aef0 *man/landscape.simulate.Rd
6790f9f7e34b5655199bae2a0a09497f *man/landscape.states.Rd
dfe1ae3ea36c88ed70f96551650106d8 *man/landscape.test.function.Rd
9396af80970b155de87fedc5058b8c2c *man/landscape.theta.h.Rd
84234f0b062fa4e23dfd4a443aba3f1b *man/landscape.theta.k.Rd
67b222e4635b8f34d3695b48e5f0a94a *man/landscape.theta.s.Rd
9489a5d4cbd80173d50f1ef2cb3931f2 *man/landscape.to.rtheta.Rd
7d2554fb1118907079b2b0eed4ad03c0 *man/landscape.write.fdist.Rd
cb72dbc3b241ff32248f561f143cf5df *man/landscape.write.foreign.Rd
a20c020fdff597a4d996ad429285c032 *src/AlleleObj.cc
f1bbb452b1130a511fe5aaf58a7dcb15 *src/AlleleObj.h
c467a184b420bbb61125252827983fba *src/AlleleTbl.cc
878fb9e9494482127692e762dcbe0785 *src/AlleleTbl.h
0e87c71f726b768c36f5ce425f4683ee *src/BaseObj.cc
c7a1e04c3ced9d3b15224dfd681f4a15 *src/BaseObj.h
0df083c802ad75f3f3c7d1747ce05f68 *src/Democlass_space.cc
e52da978822564d751f42f789c0dfcf3 *src/Democlass_space.h
f7dc140190be5e6e26fabc7b58272d58 *src/FastAllele.cc
86c4fe78c645a391975b913a78b4e43c *src/FastAllele.h
4c3132690b1d7c87f626799240b2a533 *src/FastSeqAllele.cc
4f6a3543f59c91086d274effa163a8f2 *src/FastSeqAllele.h
ffe733b5d8acb1b4a6cca7d2c1f5af79 *src/Genotype.cc
6c40b4b8061304ca9540107329909967 *src/Genotype.h
058d52c1f203277881858693ab7b269b *src/Landscape_space.cc
0e8d2eec936e219b611840c9cdbcf5b9 *src/Landscape_space.h
40c740cbde099ed5031fd39e5da40d4f *src/Makevars
4d7e0308133a01ead11506e99045fcf9 *src/PackedIndividual_space.cc
6aee76e1b7a38f5f74b9d11d0f642ef4 *src/PackedIndividual_space.h
8102b5dfae5b67bb9d66080ea203cad9 *src/RandLib.cc
21414606c30a55e6f6907c29d8b1e89e *src/RandLib.h
99892811e54f0b49cf978416f7f47b88 *src/SiteObj.cc
840fdcee1cebbe3c132a7c47f1b09ce6 *src/SiteObj.h
ea383ddb954585a1aac6db1eca7660fd *src/TransMat.cc
5fb448c73afc984a774f06bf004a677f *src/TransMat.h
74bd3bd3357f6afea5d5330e597923fe *src/const.h
5643e8a2e9da885997cb3d0587e20396 *src/kernelPop.cc
4cea79ab7e54cba07f8199b3fb12f556 *src/kernelPop.h
9c4fc171a2e7bf884436eada019e16a0 *src/metasim.h
0ff30cf377f54143290b1cae33aadc8c *src/utilities.h
