84c2eb9d8ba420a6e2c4bdfb1eece36b *DESCRIPTION
c74d90dacf720e0b3a40bef80ce6bba2 *NAMESPACE
21c65dc24b741ed55c7671d78cb8c1d4 *NEWS
835a32b1e02088e593c4fae4a5ff7049 *R/bed2index.R
4313784e41b22831997fa26155365e88 *R/bed2vcf.R
e0ffeb960ffce881dac2d1f9576dfede *R/bedr.R
4731f2547f90911e9dc5504e72db0444 *R/bedr.join.multiple.region.R
35dab95ed766bb222b1042efe3f19bf0 *R/bedr.join.region.R
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34bb496b0c0eb266faf17642811b5b77 *R/bedr.plot.region.R
27a32b302fc96749d867940d76a0fdce *R/bedr.setup.R
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2c9245df0718627fad06b48d2f9566c2 *R/bedr.subtract.region.R
8bacc23bf3605189651e8576c5b0ecf0 *R/catv.R
88ab5e050f06ee5573a994df44aa5993 *R/check.binary.R
cf524d518cdacd3665dcc813e19dee8d *R/cluster.region.R
0ce9d3b17e23236fe3c7634b31edc269 *R/convert2bed.R
7ec3e9df61c965e7517a8822c5b56f00 *R/create.tmp.bed.file.R
5c37733c71e7c78f236231731926e68a *R/determine.input.R
c5a5b2c69d44e9b15c060d371e4d30df *R/df2list.R
67ba5c0dd4fbc03e342fd65497f871a8 *R/download.datasets.R
afc621885c1889727e799f7f98607924 *R/flank.region.R
b01e97ce3e9c66ae80fc66752b4c24ed *R/get.chr.length.R
e62682282ed1e95d9a0e8ae569972ed5 *R/get.example.regions.R
962b906ff1d7000a724bf4a23c549c3b *R/get.fasta.R
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4ae93fc342635346dca0e1bf2665ff7b *R/in.region.R
2c5e740a1ab334b9abfece05f5b28822 *R/index2bed.R
9c56307ac0cfcf1434dd9c1a3e4dc33c *R/is.merged.region.R
ca439f4fda24aa8516e6aae0d1e87ea8 *R/is.sorted.region.R
3e09b76f4d81622b837e4e71b8adf173 *R/is.valid.ref.R
7478d858083e7aab6837113ba8431395 *R/is.valid.region.R
c99b6227ccca5cc705e3f39b31d412b8 *R/is.valid.seq.R
8cce36660611fc1e232717c26e494d22 *R/jaccard.R
461e8af040bb4900115bc4a4ef739675 *R/modifyList2.R
5a76131dea57132831c86f223e232314 *R/onAttach.R
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add2b783d7eeeb7179dbead846d7099a *R/permute.region.R
62aefdd325bbb621d04541c6b3fbd552 *R/process.input.R
bd5daab774696d41e3b2a4fd6ec61a26 *R/query.ucsc.R
a13d382de607f38f5425370718d95376 *R/read.vcf.R
1ff2cb13175276d3fe469ab38f6a03eb *R/reldist.R
0bc53afd954969a3bd3725b3563ab29e *R/size.region.R
c3b392edc0537c163e3bdd67eacf8762 *R/snm.R
3369364eafd7663a9c630ea07712a295 *R/strsplit2matrix.R
414992eb2c91aa33b6c1b26a32314ac6 *R/tabix.R
1257a7e41c993fae4da8c56fd0911ed6 *R/table2venn.R
144f09297f0fb02dae927d4970726f09 *R/test.region.similarity.R
184316074712d29f33a875a4662cc5e8 *R/vcf2bed.R
fb41d9e70eb084287c61ad680deeb630 *R/write.vcf.R
ca8a9930ad8ad767857b93022a60919a *build/vignette.rds
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4f5c3acf2bd8aaa6ce8bd3e6039dcf10 *inst/extdata/CosmicCodingMuts_v66_20130725_ex.vcf.gz.tbi
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b9a428544dea854180e1be41170a3c93 *inst/tests/test.in.region.R
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4f97508ba20f391df59ecdfd6adad025 *inst/tests/test.is.merged.region.R
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9ef33bed2b767babc2f2413477d1f216 *inst/tests/test.is.valid.region.R
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d90b77cb7e3175cc780786cf5209abbe *inst/tests/test.sort.region.R
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a34e93541e30a3249c7dcb4ccd9c9d7b *man/bed2index.Rd
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76c1e3e32d0bfab71ec521e6df5821a9 *man/bedr.subtract.region.Rd
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8fd32dd4377bff6bdb15b7094e40a46c *man/check.binary.Rd
54abf82bf9541202c78bb6042df2d6a8 *man/cluster.region.Rd
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8af577a9a363450a99ffc4568ee8c415 *man/create.tmp.bed.file.Rd
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6f59f6222a6e41731e0af5bb28aba97b *man/flank.region.Rd
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5e78c9c399601813b7fb08869722d099 *man/modifyList2.Rd
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7201885b37d2d58baee902449045176c *man/permute.region.Rd
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50d75ea25dddfdf70d059a647af5b9fc *man/query.ucsc.Rd
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e5427e7bc48ce2b01b95e05095f60585 *man/reldist.Rd
2286482f004d211dd4c2ee3818775a9f *man/size.region.Rd
c4b3692ef4a3f2032f254f1d20177dff *man/snm.Rd
4a31e8209df8df8c44e72b0ca11a5111 *man/strsplit2matrix.Rd
5e028594940c6ac8b435f2c4c5a70b82 *man/tabix.Rd
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2401dd91a49096f2663e4953340126b1 *man/vcf2bed.Rd
b1bb9d910d51deb07daa0a5cef6699c0 *man/write.vcf.Rd
74290c2298a8a58b4aaf639436e2f996 *tests/test.all.R
baac6b96cd8f0a70018aa5bbdd2d7255 *vignettes/GitHub2.css
e4abef96a8de82a1e0689e5b26fd79dc *vignettes/Using-bedr.Rmd
