3fa530fd26833103a9445da45f79ef91 *DESCRIPTION
3ad4b5fd306472a41ae8bf11809f75ec *NAMESPACE
086765a73351b67635ad3ad3c0137a3d *R/aaDistribution.R
02591f6920fa502319662212c9bf137a *R/clones.CDR3Length.R
809e787c91373ac57998759802cb2ea9 *R/clones.IDlist.R
056cacc88f83c6ed796ffb0ee1e9564a *R/clones.R
3cb2e1ccf626656319c7324ea5383e3f *R/clones.filterFunctionality.R
ce1fb501f22c5824856d79bcf81e2763 *R/clones.filterJunctionFrame.R
3079f715d2779e0a07ef125ccdc1fe57 *R/clones.filterSize.R
5bf31375c57e823abffa52cd3794df88 *R/clones.giniIndex.R
b4f4bd29e4f3b8d6c0eb02592a85d5da *R/clones.shared.R
794c4cb0a9ed7038af3b04458a7b7db6 *R/clones.shared.summary.R
8f80b573fdacf334060f7267a9003e3d *R/combineIMGT.R
c0b6c2f67471d739a37697f4f5e884ca *R/compare.aaDistribution.R
13a93098d32382b5459ee81eceaf7f08 *R/compare.geneUsage.R
f39abfda6bae838b585b821690e1cab9 *R/compare.trueDiversity.R
7bcf88dab99161f4ddba95100df32403 *R/dist.PCoA.R
52c636b3b8476f733ae5a8f398ae0486 *R/geneUsage.R
fb7cdc3f2fbfedacf5c94157eba9fbb7 *R/geneUsage.distance.R
bde64f8a84088e5e540e2a8202ce325d *R/plotAADistribution.R
5a577ba3e9954470322fbca7128e2e1a *R/plotClonesCDR3Length.R
97c209055a09782fa65c3e734594f693 *R/plotClonesCopyNumber.R
1e5a1073593373e66431e68b50073f24 *R/plotCompareAADistribution.R
a12be04f6075aade385c65dce4da5adb *R/plotCompareGeneUsage.R
e06fde936da16db027c3a10fcdcc4fab *R/plotCompareTrueDiversity.R
340d9ead5a5945ee0c2884d8355cf7c9 *R/plotDistPCoA.R
1ad91e38d892ecb4ea633e8c08f06654 *R/plotGeneComb.R
ab95d1c85a8aa365db3938a81394f72f *R/plotGeneUsage.R
e2cf2bc6eb465fcfeee754f56baab4e2 *R/plotSequencesMutationAA.R
2be95abca7c367b9010e225ee58ea25c *R/plotSequencesMutationBase.R
9ea17177381d121e6ac8ca46c21f75d3 *R/plotTrueDiversity.R
a074d0f513530e7f2bf3c0647e09fd97 *R/readIMGT.R
6723695afe8b2d97833cbf7fc5aa9985 *R/sequences.distance.R
0c1ff0f17b93dcd9a72961c83bebd09b *R/sequences.functionality.R
bce262b8280970bd2063ef218bf51e4f *R/sequences.geneComb.R
e9d4620b65029ad38e73261095c51f4a *R/sequences.getAnyFunctionality.R
6aba60deaf1ec9e212073d8d3627c82e *R/sequences.getAnyJunctionFrame.R
a6c5b5692d13ff76d254c4807b275b6a *R/sequences.getInFrames.R
171c10f4c50875b4c458fdf6475cdd15 *R/sequences.getOutOfFrames.R
7243f6192880758216e60bd34d4277f6 *R/sequences.getProductives.R
5c364582500261e1970b07744a1665ba *R/sequences.getUnproductives.R
a580779d22b8952f10eaf163f6f8b52c *R/sequences.junctionFrame.R
c7cc5be2460500637a72f9ec22013ea5 *R/sequences.mutation.AA.R
2f8358b82ce05c2b2758510265a1330b *R/sequences.mutation.R
a1a55acabd921cfc5f285a3de903ad67 *R/sequences.mutation.base.R
d5d7747f5df12cbf60a5fb2ef3e495bc *R/trueDiversity.R
5cffc129e55dddfe13a4fb321edde7f6 *build/vignette.rds
725e6fb5ef22b5e1fb264c2ec1bdb6a0 *data/aaseqtab.rda
a402a38483c05bf013075ca27d5e944a *data/aaseqtab2.rda
2390aa068cf9e292e1634bec6d1e14e7 *data/clones.allind.rda
50590df829c10679d071dfb13560feca *data/clones.ind.rda
69c44ab9d58bbc6dc04777fac0e459c0 *data/datalist
50f5476a3d17177d62ffb1f21294e7de *data/mutationtab.rda
b50ce7d213452cf4ef47fa69a5b866b0 *data/ntseqtab.rda
2ffdac7936f94a6c91f54652018cd290 *data/summarytab.rda
c03cd42fde754f88841cee5f39f21c80 *data/vgenes.rda
f101e42bd4145f454aa1410d38e53287 *inst/NEWS.Rmd
6e9cce8606d916d306fc81db7d34d10c *inst/NEWS.pdf
81d41ae83a90be35ecb91940000a9e70 *inst/doc/NEWS.pdf
3be013983eecdcb02721944603b5373b *inst/doc/vignette.R
2bc35b9d8c6e721a0793cbbcef1b5a51 *inst/doc/vignette.Rmd
c29a8bd21f96edf9d09e4140c55d299c *inst/doc/vignette.html
f7143141906a88dca0393dc0e30ab550 *man/aaDistribution.Rd
746f08843db207acb2e2cdaeb2a992e2 *man/aaseqtab.Rd
9e45bbc4d5919516cc9bee81c12a04a5 *man/aaseqtab2.Rd
466a94ee98114a6c26f0bd8476a1b532 *man/bcRep-package.Rd
812d7d9913cf09d1305f223981bf084f *man/clones.CDR3Length.Rd
24b3c6b14b0b02855622ceae66c83a98 *man/clones.IDlist.Rd
1888fc9b0aedffcb19beb3adb0172254 *man/clones.Rd
8c41ca8a2f0f881817a591cddbd61318 *man/clones.allind.Rd
7aa4e331e669db4fff007e5e17fc59c4 *man/clones.filterFunctionality.Rd
f1b91bd9d2b9c21606110c81ec03f81c *man/clones.filterJunctionFrame.Rd
90b69d22813919335914bf8549db393e *man/clones.filterSize.Rd
dc4043b93b624e986470509a17dae67a *man/clones.giniIndex.Rd
f839fa2b6c4e9012c3b6b2a953819862 *man/clones.ind.Rd
2a724f3b2a232a1e59c7fb5962927b95 *man/clones.shared.Rd
8f9a399131219dd76e57585b2a2840f3 *man/combineIMGT.Rd
f6d8f58a629db657c28057e5f53ecb7e *man/compare.aaDistribution.Rd
81824fbe67d554c4246f6a6367eedf3c *man/compare.geneUsage.Rd
0b72503b970756cb964a958e54b409d4 *man/compare.trueDiversity.Rd
26c7eeb5578ce5eae1dbf4b1fb5fc3f2 *man/dist.PCoA.Rd
c516ddd52c22ce5ab1c9201f58e25ec2 *man/geneUsage.Rd
bc7b96bf80374df8629a69fd4f42eb40 *man/geneUsage.distance.Rd
c53afebf988f053d2feef5e2d5d47fa5 *man/mutationtab.Rd
5299f87fdcd4e88cdaa23e062f852647 *man/ntseqtab.Rd
8fd6615de5bc66c24db5ad1f9146415c *man/plotClonesCopyNumber.Rd
0a195cb094f2e53fd1b87b67eff25f98 *man/readIMGT.Rd
d8143f304c33fafa7dc63e34fbafc675 *man/sequences.distance.Rd
d44b7f59390969f207a70ada735ecebb *man/sequences.functionality.Rd
3b81a9045f64a72b9563abf64bef3c62 *man/sequences.geneComb.Rd
6046bbd94169f15cab4311e4b7ee25fe *man/sequences.getAnyFunctionality.Rd
070be9fcaab59415ae27384238d5ce29 *man/sequences.getAnyJunctionFrame.Rd
04cf3913cc5b01ad0b8a299d1eced123 *man/sequences.junctionFrame.Rd
8171dcf54da1d650605180e1e6e6b844 *man/sequences.mutation.AA.Rd
f636579d194b991dac0dc3bb9532e9a5 *man/sequences.mutation.Rd
26349e7821848aa609ceba96931a25c2 *man/sequences.mutation.base.Rd
bffb2fcc612c5626850808b456b9ad80 *man/summarytab.Rd
c558ca30ab4346641a9c3b84b74aa0ea *man/trueDiversity.Rd
495f80c02805bdeab98a5ff218d162c7 *man/vgenes.Rd
2bc35b9d8c6e721a0793cbbcef1b5a51 *vignettes/vignette.Rmd
