7dd34e3de50d0cf3489c1a537f48c2d9 *CHANGES
2efc0cc71e27b0b0f54ba6524633424e *DESCRIPTION
aaa2214ee695530fb2da9b65959c474a *NAMESPACE
20a52a5b48f2b3bcc2083281e47a2ad9 *R/Delta.R
6e911e1cc03cd272e29ecf7e56f06190 *R/aldous.test.R
7a2e6e407d2cdcab675ff36180baaff6 *R/all.equal.treeshape.R
36777866e051eff3d9ca90007af2871a *R/ancestor.R
31eed5b78d73dbf3c566ec0852069e6f *R/as.phylo.treeshape.R
a2a26f8bfa6591fbe12fd185bf8e2615 *R/as.treeshape.R
7122e143d16e5661530784d2ca4e58f7 *R/as.treeshape.phylo.R
9a1a75faf1dc281e9f71723e98f44b09 *R/as.treeshape.treebalance.R
aa34ce86a2d823654268055278a7c437 *R/cladesize.R
a61a99c41c5f7dd7fb0f48c3f9d996d4 *R/colless.R
b07a1d2a5320008f87a65687afd5fbc8 *R/colless.test.R
bee72e8b327385afb077a30ebfc9e380 *R/cutreeshape.R
68fb1fbe5621f2b16cbc4f7e2e0775fa *R/get_PD_sample.R
073809ab0c6017ea069675cb3c9d1d59 *R/get_tree_beta.R
1f776b1b435ff7cea7a4dbc691f33e35 *R/is.binary.phylo.R
88736fbee37d172693080676cce9f562 *R/likelihood.test.R
696078f37015b86b2efe63cda20e28a8 *R/logratio.R
b5f028ec5cabba9000fe56e1dce1162d *R/maxlik.betasplit.R
2e4d425c08501ca15035f2d479db90bc *R/mcmc_alpha.R
063ee3f6412c71359a2b0f4ace19d826 *R/mcmc_eta.R
b55ee4b30cb2a5cff90de72878494b96 *R/plot.treeshape.R
bd58b8b0e245ba3afef0d05a69db5d88 *R/raldous.R
5aeff5648ab0781aef99d59ea9435b66 *R/rbiased.R
dde41bb10d9894a0088382b94b89d7d5 *R/rpda.R
b86a0fcb5966aefb9e9b38fcf81a581f *R/rtreeshape.R
172a8435e1a8c033cacd423fec690c29 *R/ryule.R
af7acaf2f41973bcce486bfe8243fcbe *R/sackin.R
277d9e6f457bae4d8ab9fc1c0b7f5edc *R/sackin.test.R
cea523d64ae1da18c06b62e3de420e4e *R/shape.statistic.R
64c6e6d16659d0ba45e309970cb9ecb9 *R/shift.test.R
494317ca310b061efc037d8d19618b6f *R/simulate_kingman.R
b328b4a208221ef59329c530dc275d61 *R/simulate_tree.R
71b715cb5c572cf07545eb91c2ef072d *R/simulate_yule.R
5d96cc2dd4f87f528f2deac19bdce6a6 *R/smaller.clade.spectrum.R
51035e1bab85017018ef4b68049dd388 *R/smaller.clade.spectrum2.R
6dbab875b458e939ffd1bf4dfa341fd7 *R/spectrum.treeshape.R
fe4b25d0b0d851b4465cec89b45b3c10 *R/subtree.test.R
1a09350611addd32df1db3182a68a4e0 *R/summary.treeshape.R
3634f353fba2a4f4daa273d52dd8f8a8 *R/tipsubtree.R
8aba438e724de1b24d926567ecbe43bd *R/treebalance.R
1ec945daf174f5e3cea19045d8e8bfe4 *R/treeshape.R
8079352158cb004288cfb560bd78da69 *README.md
c88d1c069ba48c616e5e054f7851e9cf *data/carnivora.treeshape.rda
33cf387ba65f61ba991bb85ecf2d6913 *data/cytochromc.rda
2e42d2479bc351d61f7a331262bf3987 *data/hivtree.treeshape.rda
a2f81327e994740928ea2dad87eb49ad *data/primates.rda
09b3cdfd3c52b13be79e4a9506419c47 *data/rhodopsin.rda
65dbb011821e5cd611c24b2821b2fa73 *data/universal.treeshape.rda
cbadc8cdc85b49a2c3a0679a950372d5 *demo/00Index
d802ed0e7d1f66be7d660ed2c375078c *demo/apTreeshape.R
b5792a0bb200cc10dd5c831c9389e346 *man/a_N.Rd
2468660702e56267269ccc55281b4ad2 *man/aldous.test.Rd
dd7a0647aa6e6fed1ed1e12880218ba6 *man/all.equal.treeshape.Rd
d965830d1ab2df0b568fae1eb0cdbc93 *man/apTreeshape-internal.Rd
f19aae15e112dcb71c9fa3b04264ef2a *man/as.phylo.treeshape.Rd
fb74b20d2967dbf6d0a066c3b050174e *man/as.treeshape.Rd
cc12da1dca1920612067426760426f06 *man/aux_lik.Rd
83e9f2349a10552bdd4cf85dc5ac7051 *man/bind.trees.Rd
7ea81e5714cb5452e5655f2095b627ed *man/build_tree.Rd
93495128b597e3577caf4ceb561965a3 *man/carnivora.treeshape.Rd
1d5295a310e38152fee01a16fb60770d *man/change_int.Rd
2e8e01d4634fdd4a9731ec02ee0dd9bc *man/change_int_eta.Rd
aaa63af6a89e19d321db3f958ac755e6 *man/cladesize.Rd
3b1bb45ba9e1522303e6fb8feee49eae *man/colless.Rd
cf8561d9c24ee45a801e83b2fcd2aebc *man/cutreeshape.Rd
bc50c457838132a266eb338e14d280cd *man/cytochromc.Rd
0019bd236216a5f9cd4f551efdecd099 *man/depth.Rd
7e2a86a0a34b098337d7769878516ac3 *man/enhance.Rd
cb7e17c8d002939f56b143a3a919abe4 *man/enhance_eta.Rd
5033f6d0d53b2e70e7d69cb5f2e3513c *man/get_PD_sample.Rd
18f90a14f404d479554b2d543f1c6465 *man/get_extinction_list.Rd
699f67ab9d8fcc8140d846c1830cda88 *man/get_tree_beta.Rd
85f6588d8637dbbea46b6ac4508fde7f *man/hivtree.treeshape.Rd
b1f66f3ab4ce97d6759fd296b4426b59 *man/index.test.Rd
c792ff485597300086990e5323c977c4 *man/insert.Rd
ce4cc17794590c9f877b9efbcc4e1ec6 *man/lambda.epsilon.Rd
d98c538bf21bf81ab837e9bad4e2f6f1 *man/lambda_N.Rd
27a19172b428b17bc075f32f9be70916 *man/likelihood.test.Rd
adea2c2a37cde20d355e90ef0b91ac16 *man/maxlik.betasplit.Rd
5bf71aba12aa678dbfa776f83575225d *man/mcmc_alpha.Rd
771597839a57f439c215cf00d146f2f8 *man/mcmc_eta.Rd
7304ea1f7850d60b70b968f9da1c5cae *man/nodes_depths_ordonnes.Rd
7ebf0aaf19be95e8d952571a3f5a7c0e *man/plot.treeshape.Rd
e991018375d9ecbf09c909158142ae30 *man/primates.Rd
dbba7252492c15f437f6d0cb69164aa3 *man/rbactrian.Rd
066e992cf5c077897216a858691438e1 *man/rhodopsin.Rd
158f62fc711905b0fe6d6d8ba21f7a4f *man/rtreeshape.Rd
c4f42be2a7c25f5945bc9113173e9907 *man/sackin.Rd
b977b39fb71240ab313c8e343a9ac7b8 *man/shape.statistic.Rd
dcbea089c63080af27aaf7d3542d5ac9 *man/shift.test.Rd
9d8d19fe55be0a932be5aa2ee826de44 *man/simulate.R.K.Rd
f5c0394da6388f7d926ec3d64eaa1faf *man/simulate.R.Rd
7d242f975227a0913ddf24268105ca5b *man/simulate.Tau.X.Rd
03cd800b41de099973ec87b18bedfecd *man/simulate.Yi.Rd
2135cd9b4ba4bae36d1ddc963bb6236c *man/simulate_kingman.Rd
15645029f1838b1bd593da2b4a07e727 *man/simulate_tree.Rd
30406d2cceb135988d2518883b4dbaa6 *man/simulate_yule.Rd
e828ad9123efe6dad7a2963a2dc40e6c *man/smaller.clade.spectrum.Rd
eb631672fb9ac65b2fa2ef759f5b88e4 *man/spectrum.treeshape.Rd
27007c066777cbedb74645e6572c2777 *man/split.Rd
ac205684f3f0b26ed15ae9ba174b4b5a *man/subtree.test.Rd
8985ade5aade54aa89e360600c7b8b5e *man/summary.treeshape.Rd
981fa1a9da4a4c66a2ed18424a474776 *man/tipsubtree.Rd
160bbb1fc1d871e0f3a995f8fc7279b3 *man/transform.Rd
ca72d36d9d4a49754ba975f0f4be4ac9 *man/transform_eta.Rd
f6616214a6a6df6ce83b946d73782f41 *man/treeshape.Rd
0002a1174d786e74ea6a7de6b5768847 *man/universal.treeshape.Rd
14deb4122e067ad393d2766940b8b196 *man/yule_lengths.Rd
