ffed6c882cb1db81d97b9df0e6d895ae *DESCRIPTION
da5aef4cbc86b79ed2a369ed887770f1 *NAMESPACE
5a2e62a52449986e6e91abfe3d0e5579 *NEWS.md
ac84b9cbcd441f92d4644793fedec3da *R/adjclust.R
d8528b56095bcb847d00096c313c3dd2 *R/buildHeap.R
c0d5d0c63ef83006be9f342eb9e7dc3a *R/chac.R
9d8d0352d34ad4c0b03de4e58472687e *R/helpers.R
9a5e769c993f47718fca912e19e96fb4 *R/hicClust.R
a792d9b057d8234e40603a684b1e05d5 *R/res_adjclust_0.3.0.R
3144c3131fc69ea282465839aaccbd95 *R/snpClust.R
2e1242063194818bfad02ea33b62de4c *README.md
580e81304cadf9d223e7141ac95df0de *build/vignette.rds
d35fd6b35cdb510465a49e72d7301b6d *data/res_adjclust_0.3.0.rda
50cc303938e8cca5cc05f3b9e39c01f5 *inst/doc/hicClust.R
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c249031c2a1d5395a488fb8c9ed32a46 *inst/doc/hicClust.html
967b6c223c10ad76ae60336ec894b0e5 *inst/doc/notesCHAC.R
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ca223fc343551ff021c84ea97335fd6f *inst/doc/snpClust.R
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2a1ddf9d3ae6e445fa2cf3659c451e8b *inst/extdata/hic_imr90_40_XX.rda
bd492a22b4201740430f97be6b6c45fe *inst/extdata/sample.txt
abe469addd68c05b93241b7ddf51ab7f *inst/system/createExampleLDData.R
8eb6735810efff66786e22d428cf992b *inst/system/create_hic_chrXchrX.R
ab247bcc85e5b115f6bb89fbde548770 *inst/system/create_prevfit.R
1f32e9d8c7fb43333373cca61275c0a1 *man/adjClust.Rd
baac84b24d93b5e2e4375654f287e5ae *man/chac.Rd
50b9da1c5c5d87a88a586a27051ec2bc *man/figures/README-adjClust-1.png
61611548d3ecdbde22ae162219aeb033 *man/figures/README-hicClust-1.png
efd4d2210d18a9fd14e36c8494edcfbb *man/figures/README-hicClust-2.png
26c4b1893204e5771c19971b2bbf576c *man/figures/README-snpClust-1.png
2fd8010465a9bd1e0f2cebf155cda904 *man/figures/README-snpClust-2.png
21fa4e75d01e1137ad076853dcb1f2e9 *man/hicClust.Rd
bc3c7f071da065ead847e1a6014fade4 *man/res_adjclust_0.3.0.Rd
f52e48333d96c4a40f72a2221d166a7b *man/snpClust.Rd
3cfe482297367cae0be2bde66dad2544 *src/mainFunctions.c
7c22b1b500cab25872924e218f1645f5 *src/registerDynamicSymbol.c
4543c7812c549c8a643d02ecafc49922 *tests/testthat.R
e7ceedd90ac17e94a3f0b43c0d093b86 *tests/testthat/test_adjclust_equivalentTo_hclust.R
e06a07e07569d036f0469bfd8a72b149 *tests/testthat/test_adjclust_equivalentTo_rioja.R
126afd9f413583be54d83ce2a138d9ef *tests/testthat/test_ascendingCompatibility.R
50890608af7eaa7761a1d9efe54ea345 *tests/testthat/test_correct.R
fa543492bedb98ec315e98b317f285c4 *tests/testthat/test_corrected_plot.R
78eaeb6d28387bd4d1c95b688599fc55 *tests/testthat/test_cuttree.R
3437541cbcc3c98ca088c5d1d5135575 *tests/testthat/test_dense_sparse_comparison.R
9b2f0669edd88e5c6b293049591e0648 *tests/testthat/test_final_height.R
6b738d15dc010aace0bc50e6ae5b65ee *tests/testthat/test_hicClust.R
4826d53a15ac23626822a9ca4db4711d *tests/testthat/test_modify.R
9b66bf636b6e88e9f59ecbcb6e882d6c *tests/testthat/test_similarity_equivalentTo_dissimilarity.R
cfd3504931659d9f5e91d5ed6412830b *tests/testthat/test_snpClust.R
958d16ac569c91b84990a52f76a3ec47 *tests/testthat/test_snpClust_NA-in-LD.R
54de6942a25f58ddaf55fcf0d7a851d3 *tests/testthat/test_warning_with_decreasing_height_plots.R
0f734302bb7bd6473caa32ab43e0400e *vignettes/hicClust.Rmd
3fa90a41050fd3d77f2b915e6ee39689 *vignettes/notesCHAC.Rmd
8b23c6969989858c06b51ec9b64d025a *vignettes/snpClust.Rmd
