666022b314b10fc63aaeb74ca18bef55 *DESCRIPTION
5ab3b0acb709d629bff8a7b23cab488e *NAMESPACE
4191174bdb38a09342d8a07965b86401 *NEWS
06c4d702f9c79cda69db513668ec874d *R/BF_Rao_Blackwell.R
404870f1f206e5ccacc99086148eb0f9 *R/BF_auxiliary.R
f8747c405b2e8c8acec04c9d84692a40 *R/BF_likelihoods.R
443247ce1e34466c22a75fe1bb110418 *R/BF_marginalMPT.R
f23f20dcc7491775c34c0f54858aef73 *R/BFslope.R
80b9737096751109ee49674a535ef992 *R/CollectionOfInputProcessingFunctions.R
05c44874eb4ba23e547e67a2d04f3078 *R/PPP.R
fdaadc62fb38af438b4015282adc0025 *R/RcppExports.R
e4fdbad8101cbda0c537a707a92395ee *R/T1perGroup.R
7075d3d9ed104a74b3a5b9e478290325 *R/TreeBUGS-package.R
1fae833bd00f37f0dc552e28122f5cc2 *R/arnold2013.R
d70b6f65a0f068179b217c6549cecff4 *R/betweenSubjects.R
6a5196c020a3d28ffc8c47e2d53cbc1e *R/callingSampler.R
d0695b50429b04aff96363ee4111b9c7 *R/checkFunctions.R
a8af8a27083930b4bba6b15e08dd01e9 *R/corSamples.R
3a42c58db23f905d20077883ab7deb47 *R/correlationBayes.R
da96fada2bad7014c5cf4f5bc050b2b5 *R/correlationBayesMCMC.R
e567b74107c362b0cd9c8043fb267335 *R/covCorrelationString.R
346cffd4bd1f75e7353660513d868eeb *R/covDataRead.R
13de4c675f54042227fde73113a12f95 *R/covFactor.R
025b0f21335e9c37684b05d20442347e *R/covPredictorHandling.R
278f5d12d4cc615ec982957f610610a4 *R/covariateHandling.R
d661231bcb9542e2844ed9f558275a40 *R/extendMPT.R
0b1d388013b46fb990bb0143450d4903 *R/fitBetaMPT.R
51e1ef64c38f9ca0059aaf9a8c7ba6a6 *R/fitBetaMPTcpp.R
aae14baa79d1c3a79cf3518f1a9cc294 *R/fitModel.R
03d8b86c6e5ad153c1f3b1a5e4edadcb *R/fitModelCpp.R
a7c661d1a277787f103502fa88e4cbd2 *R/fitSimpleMPT.R
ac18dfdaf2d9434732b38a0006cbebcd *R/fitTraitMPT.R
0345bdc6de00995abac7472b63a825da *R/genDataBeta.R
81f70ae96e30c56ba0f86d9369aa4a9d *R/genDataCheck.R
9054a1fb579566a8b0a84a210d11d1ba *R/genDataMPT.R
b4b0e3ace83efb1d1e09f9b8fba91172 *R/genDataTrait.R
c6b9f952fafa323ceee7e9fdbe2073bd *R/getGroupMeans.R
6949f17c38b9de68671a85a1ad49f532 *R/getParam.R
c8efbc40115455e6059c9d7ad151e6ee *R/makeModelDescription.R
3d3646fb068399795abd9370b47d9d02 *R/parseEQN.R
0104afc3766ed147f0cec0a0d7bbacd6 *R/parseRestrictions.R
024526e21771f96e9941d8b0cba974d6 *R/plotConvergence.R
97f61dde01c9496e4f64e3d2e2f07f19 *R/plotDistribution.R
c794c9cc59251d5bd6069764850bdf0c *R/plotFit.R
1e066110d55da6d0af7610e732cea2aa *R/plotFrequencies.R
138ca9ed06a4938ef129ce029552ccaf *R/plotParameters.R
a6032ba29b1f07076da5827faa6aa9f7 *R/plotPrior.R
97e62704355d0f14c62849630398cc96 *R/plotPriorPost.R
cbf387f20259c11cf80be41205915bac *R/posteriorPredictive.R
a11f63159df4e40b21693ea90ee74a42 *R/printMPT.R
e09e0dfcbb4be1d5be3b1e07990eb654 *R/priorPredictive.R
8a95495fefbe1cc83523b63ae16238ab *R/probitInverse.R
cb5b9f1ef6d750987b5e3e5c3c323707 *R/readEQN.R
2e02684f789171c8c08c10dd84ec6cb3 *R/renameBUGSoutput.R
65681d40393bdbeafad2c106cf5009cc *R/sampleHyperprior.R
5efa36ea86029034ba0fc0f321569bd3 *R/summarizeMCMC.R
0e6d93615d5ff46f1fbc9e9272ce780f *R/summarizeMPT.R
437a53a16f06ec071c86d8fd69e55e30 *R/testHetChi.R
841b475ec9ed40dff8a9dce02703752b *R/testHetPerm.R
6316d30d5b102da353919b6b3f8c5d8f *R/thetaHandling.R
e1bd196f530c9eb540062a4312a3b6db *R/transformedParModelfile.R
7edceeed555e769f38f72a05670ba25b *R/transformedParPosthoc.R
9c2412bf827834640f538071ad44e7e6 *R/within_subject_EQN.R
502d78165c5bd5eb54af1a5bfdaf7cc3 *R/writeSummaryToFile.R
ef2bef1c603952c9005c7904e6a33dc0 *build/vignette.rds
71355a4f936ee6d3f69e673fa73d4237 *data/arnold2013.RData
598210b17a9771fce655dd2519326b55 *inst/CITATION
05e74db71d7fafbaacb957b1daa34dba *inst/MPTmodels/2htm.eqn
d9a6bed11ce4e4545fd0001882d8b950 *inst/MPTmodels/2htsm.eqn
c68dc54b1cbda575c4d8288f1bcabca8 *inst/MPTmodels/winbugs_zero_trick.jags
797103cbbda897f9525caffeb124cb90 *inst/doc/TreeBUGS_1_intro.R
de87a4956855961f3621624905f51519 *inst/doc/TreeBUGS_1_intro.Rmd
f5a69cbeeee66b33bbff403ce602dc3c *inst/doc/TreeBUGS_1_intro.html
c6f53635c6e3eb23c9980e5a0343a234 *inst/doc/TreeBUGS_2_extended.R
e39f1a4c9d9c25ce90f483f2253b50a5 *inst/doc/TreeBUGS_2_extended.Rmd
beac3b7993514230ade3386800b66136 *inst/doc/TreeBUGS_2_extended.html
d56600053555a75b49b8543ee96a3b5a *man/BayesFactorMPT.Rd
68d51e50e95ea92242dd0969fcec8b25 *man/BayesFactorSlope.Rd
d63efc0c227d5788d5ff562cecddaebd *man/PPP.Rd
a1911798fa872884d8033ac931a690f7 *man/TreeBUGS-package.Rd
e501f063e273210aef3780075699c3c1 *man/arnold2013.Rd
dd168ac1e3f2332045f2d54a58d12f6d *man/betaMPT.Rd
b988d219508bb5bd04f0c9417092fbd2 *man/betaMPTcpp.Rd
22fb8c5d3eb20c5329d2f527da47534d *man/betweenSubjectMPT.Rd
3098feb08bcd5558bb8b550c4bd3d64f *man/correlationPosterior.Rd
6c0dfa209ea176946d00441a33f6f5d7 *man/extendMPT.Rd
623e441d03e7537a61eb6f5efe87ec8a *man/genBetaMPT.Rd
62b57b70a58669357649b20b089a01b0 *man/genMPT.Rd
9bb089dd152c9d7838a709a6adbacbf2 *man/genTraitMPT.Rd
56bc1dcc32e88eaa1f042d140b9fea4c *man/getGroupMeans.Rd
23caa6e03c23fda89cc0de0bfdf8515e *man/getParam.Rd
d9362cf3a3d053ce9767cdbad011577c *man/marginalMPT.Rd
59ec54cf7fb541a477a25f5be7f6e240 *man/plot.Rd
2f14622328cd03bb2e6d8b776142f21f *man/plotDistribution.Rd
63c8b4bdebfbbb8dabc510cb1022be82 *man/plotFit.Rd
6da2d87cd7b118acdb78d2f4b61285b5 *man/plotFreq.Rd
1be7ee213b22638aaf3dfa938387990c *man/plotParam.Rd
6474cf3ee20b6a511895ed1da1896019 *man/plotPrior.Rd
3ad7d2cd89c9ba1c91f05db33758e33c *man/plotPriorPost.Rd
4be192fd14fb6c424d6a84a89c4eb992 *man/posteriorPredictive.Rd
8237437e7f39fb22440c6c10a58a057a *man/priorPredictive.Rd
da3f6bc411873ed15f4082aa5df2832c *man/probitInverse.Rd
23cb0c0b8f12287a3dee8d44d4e87489 *man/readEQN.Rd
1ae8c8c968ebec00fb11e31a11e12d30 *man/simpleMPT.Rd
a318a2129a7c8bcde41168063ceb718c *man/summarizeMCMC.Rd
4ead76f88196fe795e113111a3e4455e *man/summarizeMPT.Rd
cf90d63c3a0d317b292c0a877d276e6e *man/testHetChi.Rd
19227d2da03f42b67a33811fd8a986b1 *man/testHetPerm.Rd
c2c4f4d91db22179dfb43570fbe1cf94 *man/traitMPT.Rd
bbc5d9b86617d49485202dfac2f00bba *man/transformedParameters.Rd
7c60d26e5a977740228edadf86a685af *man/withinSubjectEQN.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
a2b199c76f7506ba6f711de5494bb286 *src/RcppExports.cpp
37711264952b645e74638fa67dbe13ce *src/betaMPT.cpp
8ff61250f76509012563dac0083e59b4 *src/init.c
a34ce7c6b1a02949b611b62fceeca759 *src/loglikMPT.cpp
3cd4ae2b745a244c81a09946f6d340fe *tests/testthat.R
03d4607c59a68726271ebfe1905b5dbb *tests/testthat/test_genMPT.R
e30f460b6ca9ba84b1e47013b34ca259 *tests/testthat/test_readEQN.R
de87a4956855961f3621624905f51519 *vignettes/TreeBUGS_1_intro.Rmd
e39f1a4c9d9c25ce90f483f2253b50a5 *vignettes/TreeBUGS_2_extended.Rmd
