e15468f5a9d511a7f8f901e62c92b39b *DESCRIPTION
8c3885938e1541141b4fc5a9af96bbfe *NAMESPACE
c13c007804c5996cd8d44c2313b0ce31 *NEWS
e371b47571466583c9c10e91c15653a3 *R/CollectionOfInputProcessingFunctions.R
394af1a32fafcdcb46e1ab2fd72d7c14 *R/PPP.R
e2cdaba051fa69426c98698a4b0b362c *R/RcppExports.R
e4fdbad8101cbda0c537a707a92395ee *R/T1perGroup.R
b11a07ea822036f544e4e16ef537b562 *R/TreeBUGS-package.R
e64237e82cbdf104cf4d76a65b5c9dcf *R/betweenSubjects.R
573575f06edcb8048ed12a2084a7e69a *R/callingSampler.R
be1058fbcc126500bed01f65e5b6f3db *R/checkFunctions.R
a8af8a27083930b4bba6b15e08dd01e9 *R/corSamples.R
e567b74107c362b0cd9c8043fb267335 *R/covCorrelationString.R
8a8a1019dd89ef7880b69dbb8dc2c469 *R/covDataRead.R
13de4c675f54042227fde73113a12f95 *R/covFactor.R
025b0f21335e9c37684b05d20442347e *R/covPredictorHandling.R
eeb8e47385b05e5c56e46b09bddd3eb1 *R/covariateHandling.R
8f2c4ab29ea8a2e4f06165390dc27084 *R/extendMPT.R
e3786c4da1567fe946e1a0f8bedf0c42 *R/fitBetaMPT.R
aa5698fa23071924924e6894aeb56070 *R/fitBetaMPTcpp.R
16e4d05de2b5d77ed2dd3c36eab9b223 *R/fitModel.R
b1384b8cfc845b2ff9dc8428e6eccf5c *R/fitModelCpp.R
6c0b3d0f22dee0e4647746890ddfaf4f *R/fitSimpleMPT.R
5fb58f0a1ba645ed56a32f08bf8dbb68 *R/fitTraitMPT.R
bcf0b632c86863b61cec1202a5574230 *R/genDataBeta.R
df907721e5f348c83c2c4c6b15c416ba *R/genDataCheck.R
bd89d2f0949f9c56fd047d0df00ab377 *R/genDataMPT.R
22ba285fbc0737ca5132305ad8dd997a *R/genDataTrait.R
c6b9f952fafa323ceee7e9fdbe2073bd *R/getGroupMeans.R
6949f17c38b9de68671a85a1ad49f532 *R/getParam.R
2984746d6aeac3d28b560dcd0a61d8cc *R/getTransformedParameters.R
ac63918ad978f9edd18ec4140f1bbe3b *R/makeModelDescription.R
04b4ca8a301d5829072587c1fbbd3efa *R/parseEQN.R
dc80cea1054107870028bfb3f82eb9c5 *R/parseRestrictions.R
de38c3735e1f8058d9f2b2a376cd2031 *R/plotConvergence.R
1445fdfbfc56dcc0b227eb0e8e96d538 *R/plotDistribution.R
2af9cde4b0380b0d367794e15c113082 *R/plotFit.R
f486b47dcc883f01059cc875c9c54541 *R/plotFrequencies.R
8957f39d972057362c2ecc53e6d028bf *R/plotParameters.R
933047b2b2b945572a69624050dc912e *R/plotPriorPost.R
cb5a709aa7d93885723a327ce88099f8 *R/posteriorPredictive.R
c2e01cbc66813b15f444686b9d37f9a0 *R/printMPT.R
a18e182a82b1501d3e61413a3574616c *R/readEQN.R
2e02684f789171c8c08c10dd84ec6cb3 *R/renameBUGSoutput.R
5559038ea2d2a89992a0b03f98ccd331 *R/summarizeMCMC.R
8635f888c73a40e7cf161b12f76273de *R/summarizeMPT.R
919d5120b34bccc0facce144169105b6 *R/testHetChi.R
841b475ec9ed40dff8a9dce02703752b *R/testHetPerm.R
6316d30d5b102da353919b6b3f8c5d8f *R/thetaHandling.R
502d78165c5bd5eb54af1a5bfdaf7cc3 *R/writeSummaryToFile.R
4591b21e8a3781936de5c128efc7da62 *build/vignette.rds
2aa0af4fda31640497c9a5e85044a5b1 *inst/CITATION
05e74db71d7fafbaacb957b1daa34dba *inst/MPTmodels/2htm.eqn
7c920492bc3a445b88225203ea780d51 *inst/MPTmodels/2htsm.eqn
9c92c27bc9259deebe0311caf3a02e56 *inst/doc/TreeBUGS_1_intro.R
de87a4956855961f3621624905f51519 *inst/doc/TreeBUGS_1_intro.Rmd
048daeb3e04885c54050874f2127c6ff *inst/doc/TreeBUGS_1_intro.html
f42cd6cc3a3785b0ee92e9c7c20be9bd *inst/doc/TreeBUGS_2_extended.R
e39f1a4c9d9c25ce90f483f2253b50a5 *inst/doc/TreeBUGS_2_extended.Rmd
40dfa7f9985d80bbd7783008fb0b3010 *inst/doc/TreeBUGS_2_extended.html
f2e879ce4d415deca0cbc9932e28d1c6 *man/PPP.Rd
cfa94c3e82da04fb3555b48627b6da79 *man/TreeBUGS.Rd
5ffcb1329f89a088a616330e5d9ec198 *man/betaMPT.Rd
da4f2c358e727d985862652c99361a90 *man/betaMPTcpp.Rd
15ea3a0deca45718882810676d0ee32e *man/betweenSubjectMPT.Rd
18218d15b382653af9bd24491b6d8518 *man/extendMPT.Rd
43a0d7a0c6d7139d7e700065b987e418 *man/genBetaMPT.Rd
44c57aba1e143c48cbc2e5bbd1402bc8 *man/genMPT.Rd
81359bd5a396da7ca32ddd89287ff2d3 *man/genTraitMPT.Rd
d2332c80706738bef1acd597138837cf *man/getGroupMeans.Rd
c70d1b908cc65b9360c33ad0810e5b2d *man/getParam.Rd
c7d63d9cc498c660418e6aee28ec63d2 *man/plot.Rd
cabd721d620a1d08e842d76de2bd91c3 *man/plotDistribution.Rd
08b33a5815b223832a12c786c1461217 *man/plotFit.Rd
98bcb4bf5ab1378776b1b2ab86865421 *man/plotFreq.Rd
32083e1130651099117c3616d7188692 *man/plotParam.Rd
bc219631bbd1e4f3837174aaaae1b836 *man/plotPriorPost.Rd
17484a598720f390e4e6840813165e36 *man/posteriorPredictive.Rd
e6da77d5240009172bbf15e59caa2a2d *man/readEQN.Rd
45d4109614f4b05363f90dfcb934b500 *man/simpleMPT.Rd
76f2e71a96285bb60499376255dbf99a *man/summarizeMPT.Rd
b20bf38cb497dff11704c8e27d948008 *man/testHetChi.Rd
7d5603f4a47da8ac3f41e95b3f039cc2 *man/testHetPerm.Rd
8eedb64bbefd8a4160bf4d48337ca711 *man/traitMPT.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
8d46d69896a1f1d31ed76035a0e49d67 *src/Makevars.win
f001af2b0b60f3e7d9e172a32ba6079f *src/RcppExports.cpp
1f5eb9c612bd4e2d84a71b406dfdc81d *src/betaMPT.cpp
de87a4956855961f3621624905f51519 *vignettes/TreeBUGS_1_intro.Rmd
e39f1a4c9d9c25ce90f483f2253b50a5 *vignettes/TreeBUGS_2_extended.Rmd
