2009-04-10 13:35  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update the version number and the
	  ChangeLog file

2009-04-10 10:06  mathieu_ribatet

	* src/covariance.c: Minor changes

2009-04-10 10:06  mathieu_ribatet

	* R/geomgauss.R, R/gradients.R, src/gradients.c, src/header.h: Add
	  the computation of the gradient for the geometric gaussian model

2009-04-09 14:18  mathieu_ribatet

	* src/pairwiselik.c: Minor optimizations

2009-04-09 14:17  mathieu_ribatet

	* src/gradients.c: Minor optimizations - and fix a bug in
	  Schlather's gradient

2009-04-09 14:16  mathieu_ribatet

	* src/covariance.c: Minor optimizations

2009-04-07 15:45  mathieu_ribatet

	* src/utils.c: Some minor optimizations

2009-04-07 15:44  mathieu_ribatet

	* src/univllik.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:44  mathieu_ribatet

	* src/spatgevlik.c: Minor change

2009-04-07 15:43  mathieu_ribatet

	* src/smith3d.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:42  mathieu_ribatet

	* src/smith.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:42  mathieu_ribatet

	* src/schlatherind.c: Bug : replace '|' by '||' i.e. logical
	  operator

2009-04-07 15:42  mathieu_ribatet

	* src/schlather.c: Optimize the computation of the pairwise
	  likelihood

2009-04-07 15:42  mathieu_ribatet

	* src/pairwiselik.c: Optimize the computation of the pairwise
	  likelihood

2009-04-07 15:41  mathieu_ribatet

	* src/nsgeomgauss.c: Bug : replace '|' by '||' i.e. logical
	  operator

2009-04-07 15:41  mathieu_ribatet

	* src/gradients.c: Optimize the computation of the gradient and fix
	  some errors

2009-04-07 15:40  mathieu_ribatet

	* src/geomgauss.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:40  mathieu_ribatet

	* src/fitcovmat.c: Optmize the computation of weighted sum of
	  squares

2009-04-07 15:39  mathieu_ribatet

	* src/covariance.c: Optmize the computation of pairwise covariance

2009-04-07 15:39  mathieu_ribatet

	* R/starting.values.R: Minor change

2009-04-07 15:38  mathieu_ribatet

	* R/spatgev.R: Now fitspatgev uses all the optimizers as in
	  fitmaxstab

2009-04-07 15:37  mathieu_ribatet

	* R/gradients.R: Add argument jacobian = TRUE for consistency with
	  other functions

2009-04-07 15:37  mathieu_ribatet

	* R/fitcovmat.R: Change the default starting values

2009-02-19 13:05  mathieu_ribatet

	* man/fitmaxstab.Rd: Add references (Mehdi and Simone)

2009-02-17 13:46  mathieu_ribatet

	* src/covariance.c: Speed up the code

2009-02-17 13:45  mathieu_ribatet

	* DESCRIPTION: Update the version number

2009-02-17 13:45  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/layout.sty,
	  inst/doc/references.bib: Update the vignette

2009-02-07 21:19  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update the ChangeLog and the DESCRIPTION
	  file for the version 1.1-0

2009-02-07 21:10  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Fix an error in the definition
	  of a elliptical covariance function

2009-02-05 23:43  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/layout.sty,
	  inst/doc/references.bib: Update the vignette

2009-02-05 23:42  mathieu_ribatet

	* R/fitcovmat.R: Fig a bug when held fixing parameter and defining
	  starting values

2009-02-05 15:03  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/references.bib:
	  Update the vignette

2009-02-05 15:03  mathieu_ribatet

	* R/psplines.R: Redifine the GCV score so that it has the same
	  scale as CV

2009-01-31 23:40  mathieu_ribatet

	* R/utils.R: Found a more clever way to deal with 1-dimensional
	  coordinates

2009-01-31 23:33  mathieu_ribatet

	* R/utils.R: The function distance wasn't working if the
	  coordinates where scalar,
	  fixed!

2009-01-30 23:52  mathieu_ribatet

	* R/fitcovmat.R: Set weights that are really small (i.e. <= 1e-4)
	  to more feasible
	  values

2009-01-18 17:36  mathieu_ribatet

	* man/fitcovariance.Rd, man/fitcovmat.Rd, man/fitspatgev.Rd: The
	  dots arguments was inverting with the start one

2009-01-18 17:35  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Remove draft sections from the
	  vignette

2009-01-18 17:35  mathieu_ribatet

	* R/fitcovmat.R: Use different function names to avoid warning
	  messages when compiling

2009-01-18 15:10  mathieu_ribatet

	* R/fitcovmat.R: Improve how starting values are defined

2009-01-18 15:10  mathieu_ribatet

	* R/geomgauss.R, R/schlatherind.R, R/spatgev.R: Improve how
	  starting values are defined

2009-01-18 15:09  mathieu_ribatet

	* R/starting.values.R: Improve how starting values are defined

2009-01-16 17:35  mathieu_ribatet

	* R/fitcovmat.R, man/fitcovariance.Rd, src/fitcovmat.c,
	  src/header.h: Allow the use of the independent Schlather and
	  geometric Gaussian
	  models for the least squares fitting procedure

2009-01-15 18:31  mathieu_ribatet

	* R/geomgauss.R: Fix a bug in defining the starting values for
	  geomgaussfull

2009-01-14 23:19  mathieu_ribatet

	* R/extcoeff.R, R/madogram.R, inst/doc/SpatialExtremesGuide.Rnw:
	  Minor changes

2009-01-14 13:24  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Add some proofs

2009-01-14 13:23  mathieu_ribatet

	* R/starting.values.R: Fix a bug. I omit to specify the covariance
	  model when computing
	  appropriate starting values for the Schlather model

2009-01-14 13:23  mathieu_ribatet

	* R/madogram.R, src/madogram.c: We now use the corrected
	  lambda-madogram - thanks to D. Cooley

2009-01-12 09:06  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Extend the response surfaces
	  section - not finished

2009-01-12 09:03  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Add proof for the derivation
	  of the Smith and geometric Gaussian
	  models

2009-01-06 15:06  mathieu_ribatet

	* man/lmadogram.Rd: Fix a wrong argument in the example

2009-01-03 01:58  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Improve (a lot!) the package
	  vignette. It's for from being finished
	  though...

2009-01-03 01:56  mathieu_ribatet

	* R/modelChecking.R, R/starting.values.R: Minor changes

2009-01-02 17:43  mathieu_ribatet

	* inst/doc/references.bib: Update reference list

2009-01-02 17:43  mathieu_ribatet

	* R/plots.R: Move the qqextcoeff function to the modelChecking.R
	  file

2009-01-02 17:42  mathieu_ribatet

	* R/selection.R: Minor changes

2009-01-02 17:42  mathieu_ribatet

	* R/starting.values.R: Now starting values for the GEV margins are
	  defined by using the
	  fitspatgev function

2009-01-02 17:42  mathieu_ribatet

	* R/spatgev.R: Minor changes

2009-01-02 17:41  mathieu_ribatet

	* R/geomgauss.R, R/nsgeomgauss.R, R/schlather.R, R/schlatherind.R,
	  R/smith.R: Pass defaults values for parscale and change the
	  initialization for
	  starting values

2009-01-02 17:40  mathieu_ribatet

	* R/extcoeff.R: Moving the madogram function to the madogram.R file

2009-01-02 17:39  mathieu_ribatet

	* R/covariance.R: If xlim is supplied the function doesn't compute
	  appropriate x.range

2009-01-02 17:38  mathieu_ribatet

	* src/header.h: The header for the madogram-based approaches

2009-01-02 17:38  mathieu_ribatet

	* src/covariance.c, src/pairwiselik.c, src/utils.c: Optimize the
	  code: now fitting a max-stable process by maximizing the
	  pairwise-likelihood is 40% times faster

2009-01-02 17:36  mathieu_ribatet

	* man/anova.Rd, man/fitmaxstab.Rd, man/fitspatgev.Rd,
	  man/madogram.Rd: Update the documentation files

2009-01-02 17:35  mathieu_ribatet

	* inst/doc/Figures/geomGauss2Sim.eps,
	  inst/doc/Figures/geomGauss2Sim.pdf: Add figures for the geometric
	  gaussian process - 2 simulations

2009-01-02 17:34  mathieu_ribatet

	* R/madogram.R, R/modelChecking.R, R/univdist.R, inst/doc/Figures,
	  man/GEV.Rd, man/GPD.Rd, man/fmadogram.Rd, man/lmadogram.Rd,
	  man/qqgev.Rd, src/madogram.c: Add the madogram-based approaches,
	  model checking and univariate EVD
	  functions

2008-12-19 15:54  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Update the package Vignette

2008-12-19 10:03  mathieu_ribatet

	* man/SpatialExtremes.Rd: Updating the main man page.

2008-12-19 10:00  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Updating the vignette.

2008-12-18 08:35  mathieu_ribatet

	* man/SpatialExtremes.Rd: Wrong link to the profile2d.maxstab
	  function

2008-12-17 21:18  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Correct English and grammar
	  thanks to Anthony

2008-12-17 20:22  mathieu_ribatet

	* R/fitcovmat.R, src/fitcovmat.c: Test if we have 0 weights and set
	  a really huge value for non feasible
	  regions

2008-12-17 20:21  mathieu_ribatet

	* src/schlatherind.c: Changes due to the new way I deal with non
	  feasible region

2008-12-16 18:49  mathieu_ribatet

	* R/fitcovmat.R: Improve this functions

2008-12-16 18:48  mathieu_ribatet

	* R/starting.values.R: The sill isn't fix for the starting values
	  as it may cause troubles
	  when fixing it for the model definition

2008-12-16 18:47  mathieu_ribatet

	* R/spatgev.R: Minor change: adding the logLik value in the output

2008-12-16 18:47  mathieu_ribatet

	* R/smith.R: I forgot to pass the option iso = iso when computing
	  the variance of
	  the score

2008-12-16 18:44  mathieu_ribatet

	* src/gradients.c: Fix a bug in the computation of the gradient
	  (only present when
	  reponse surfaces are used for the GEV parameters)

2008-12-16 18:41  mathieu_ribatet

	* src/extcoeff.c: Do not set pointwise estimate to 1 or 2 if they
	  lie outsite of [1,2]

2008-12-16 18:40  mathieu_ribatet

	* src/covariance.c, src/fitcovmat.c, src/geomgauss.c,
	  src/nsgeomgauss.c, src/pairwiselik.c, src/schlather.c,
	  src/schlatherind.c, src/smith.c, src/smith3d.c, src/utils.c:
	  Final change for unfeasible regions: finally setting MINF to the
	  log-likelihood for unfeasible region is the "best" way

2008-12-16 18:38  mathieu_ribatet

	* man/covariance.Rd, man/extcoeff.Rd, man/fitmaxstab.Rd,
	  man/fitspatgev.Rd, man/modeldef.Rd: Update and refine the
	  documentation files

2008-12-12 16:22  mathieu_ribatet

	* src/univllik.c: Improve the code for speed

2008-12-11 21:25  mathieu_ribatet

	* R/fitcovmat.R, man/fitcovariance.Rd, man/fitcovmat.Rd: Using the
	  optim as optimizer instead of nlm - more robust

2008-12-11 15:09  mathieu_ribatet

	* R/fitcovmat.R, R/starting.values.R: Adjust the starting values

2008-12-11 15:09  mathieu_ribatet

	* R/gradients.R, R/selection.R, R/spatgev.R, man/TIC.Rd,
	  man/anova.Rd, man/fitspatgev.Rd, man/print.spatgev.Rd,
	  src/gradients.c, src/header.h: Computes the sandwich estimate of
	  the asymptotic covariance
	  matrix. TIC and ANOVA are thus available.

2008-12-10 20:21  mathieu_ribatet

	* man/fitspatgev.Rd, man/predict.spatgev.Rd, man/print.spatgev.Rd:
	  Add a function to fit a "spatial" gev model e.g. GEV parameters
	  are
	  modelled through response surfaces: doc files.

2008-12-10 15:56  mathieu_ribatet

	* src/univllik.c: Fix a bug in testing if the scale and shape
	  paremeters were badly
	  defined.

2008-12-10 15:55  mathieu_ribatet

	* R/methods.R, R/predict.R, R/spatgev.R, src/header.h,
	  src/spatgevlik.c: Add a function to fit a "spatial" gev model
	  e.g. GEV parameters are
	  modelled through response surfaces. Related methods and
	  predictions
	  are also implemented.

2008-12-09 16:17  mathieu_ribatet

	* R/nsgeomgauss.R, R/starting.values.R, src/header.h,
	  src/nsgeomgauss.c: Add the non-stationary geom. gauss. model with
	  response surfaces for
	  the GEV parameters

2008-12-07 12:54  mathieu_ribatet

	* src/covariance.c: Minor change

2008-12-07 12:18  mathieu_ribatet

	* src/covariance.c, src/utils.c: Optimizing the C code: improve
	  conditioning tests

2008-12-07 11:34  mathieu_ribatet

	* man/SpatialExtremes.Rd, man/TIC.Rd, man/condmap.Rd,
	  man/extcoeff.Rd, man/fitmaxstab.Rd, man/rb.Rd: Proof-read the man
	  pages due to a mail in the r-devel list

2008-12-06 15:34  mathieu_ribatet

	* src/nsgeomgauss.c: Minor changes

2008-12-06 15:34  mathieu_ribatet

	* src/covariance.c: Fix a bug in the nsgeomgauss covariance
	  function computations

2008-12-03 09:22  mathieu_ribatet

	* R/fitcovmat.R: Do not use the same function name whatever the iso
	  argument is to
	  avoid a warning message while building the package

2008-12-03 09:22  mathieu_ribatet

	* R/nsgeomgauss.R, man/internals.Rd: Masking the non-stationary
	  geom. gauss. model for the moment

2008-12-03 09:21  mathieu_ribatet

	* src/covariance.c: There was an uninitialized variable

2008-12-03 08:33  mathieu_ribatet

	* src/utils.c: Remove unused variable

2008-12-02 17:15  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update ChangeLog and DESCRIPTION for the
	  new release

2008-12-02 17:02  mathieu_ribatet

	* R/plots.R, man/qqextcoeff.Rd: Add a function that performs a
	  QQ-plot for the extremal coefficient

2008-12-02 15:58  mathieu_ribatet

	* src/nsgeomgauss.c: Change the way I deal with non-feasible
	  regions

2008-12-02 15:58  mathieu_ribatet

	* man/internals.Rd: Mask the non-stationary geom. gauss. model

2008-12-02 15:57  mathieu_ribatet

	* R/fitcovmat.R, R/fitmaxstable.R, R/gradients.R, R/smith.R,
	  R/starting.values.R, man/fitcovmat.Rd, man/fitmaxstab.Rd:
	  Implementation of an isotropic smith's model

2008-12-02 10:53  mathieu_ribatet

	* R/starting.values.R, src/covariance.c, src/fitcovmat.c,
	  src/geomgauss.c, src/nsgeomgauss.c, src/pairwiselik.c,
	  src/schlather.c, src/schlatherind.c, src/smith.c, src/smith3d.c,
	  src/utils.c: Change the way starting values are defined - i.e.
	  fixing the sill
	  Change the way we deal with non feasible regions

2008-11-28 12:12  mathieu_ribatet

	* R/fitmaxstable.R, R/geomgauss.R, R/nsgeomgauss.R: Add the
	  geometric gaussian model - non stationary

2008-11-28 12:11  mathieu_ribatet

	* src/covariance.c, src/header.h, src/nsgeomgauss.c, src/utils.c:

2008-11-27 14:42  mathieu_ribatet

	* src/covariance.c, src/extcoeff.c, src/fitcovmat.c,
	  src/geomgauss.c, src/schlather.c, src/schlatherind.c,
	  src/smith.c, src/smith3d.c, src/univllik.c, src/utils.c: Add
	  comments within the code.
	  Tweak how I deal with the unfeasible region when the GEV
	  parameters
	  are ill-defined

2008-11-19 13:58  mathieu_ribatet

	* R/starting.values.R: There was a duplicate of function
	  .start.schlatherind

2008-11-19 11:36  mathieu_ribatet

	* src/covariance.c: Fix a bug in geomCovariance, sigma2 was not set
	  to the right value
	  when it tends to get large

2008-11-19 11:29  mathieu_ribatet

	* src/geomgauss.c: Update some comments in the code

2008-11-19 11:20  mathieu_ribatet

	* DESCRIPTION: Pass the RandomFields packages as a dependence

2008-11-19 11:16  mathieu_ribatet

	* R/extcoeff.R, man/madogram.Rd: Add an angle argument in
	  madogram() to help in detecting anisotropy

2008-11-18 15:53  mathieu_ribatet

	* src/schlatherind.c: Fix a bug in schlatherinddsgnmat: the non
	  feasible region was not
	  penalized for all cases

2008-11-17 12:57  mathieu_ribatet

	* src/covariance.c: Changing how to deal with smooth >= 2 for the
	  powered exponential
	  covariance model

2008-10-31 16:45  mathieu_ribatet

	* src/covariance.c, src/fitcovmat.c, src/geomgauss.c, src/header.h,
	  src/schlather.c, src/schlatherind.c, src/smith.c, src/smith3d.c,
	  src/utils.c: Change the behaviour with non-feasible regions:
	  seems to be more
	  robust now...

2008-10-28 13:44  mathieu_ribatet

	* src/covariance.c: Add an upper bound (i.e. 3) for the sigma2
	  parameter in the geometric
	  gaussian process

2008-10-24 07:54  mathieu_ribatet

	* R/covariance.R, src/covariance.c: Update the bounds for the
	  covariance functions to avoid numerical
	  issues

2008-10-22 16:05  mathieu_ribatet

	* DESCRIPTION: Add a link to the project web page

2008-10-22 12:23  mathieu_ribatet

	* src/univllik.c, src/utils.c: Now the Gumbel distribution is
	  considered whenever the shape parameter
	  is <= 1-6

2008-10-22 12:22  mathieu_ribatet

	* R/extcoeff.R, man/madogram.Rd: Change the madogram function. Now
	  it is computed for each pairwise
	  distance - bins can be optionnaly passed though

2008-10-16 12:39  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, man/condmap.Rd,
	  man/covariance.Rd, man/extcoeffemp.Rd, man/fitcovariance.Rd,
	  man/fitmaxstab.Rd, man/madogram.Rd, man/map.Rd,
	  man/predict.maxstab.Rd, man/profile.maxstab.Rd: Modifying the
	  vignette and example to reduce the time to build the
	  package

2008-10-13 10:28  mathieu_ribatet

	* src/geomgauss.c, src/gradients.c, src/schlather.c,
	  src/schlatherind.c, src/smith.c, src/smith3d.c: Cleaning the
	  code: unused declared variables
	  Fix a mistake in computing the gradient dz2shape instead of
	  dz2scale

2008-10-11 22:45  mathieu_ribatet

	* man/prior.Rd: remove one copy of prior.Rd

2008-10-11 22:44  mathieu_ribatet

	* man/posterior.Rd: remove one copy of posterior.Rd

2008-10-09 08:53  mathieu_ribatet

	* R/mcmc.R: moving mcmc.R to the development folder

2008-10-07 13:45  mathieu_ribatet

	* R/psplines.R: Misplace conditional if resulting in cv = NA even
	  when penalty = "gcv"
	  or "cv"

2008-10-06 22:12  mathieu_ribatet

	* R/fitmaxstable.R, R/plots.R, man/SpatialExtremes.Rd,
	  man/anova.Rd, man/condmap.Rd, man/fitmaxstab.Rd: Add the
	  conditional quantile map and refine the documentation

2008-10-06 20:08  mathieu_ribatet

	* doc: Moving the package to the /pkg folder

2008-10-06 20:07  mathieu_ribatet

	* R: Moving the package to the /pkg folder

2008-10-06 20:07  mathieu_ribatet

	* doc, doc/SpatialExtremesGuide.Rnw, doc/references.bib: Moving the
	  package to the /pkg folder

2008-10-06 20:07  mathieu_ribatet

	* inst: Moving the package to the /pkg folder

2008-10-06 20:06  mathieu_ribatet

	* man: Moving the package to the /pkg folder

2008-10-06 20:06  mathieu_ribatet

	* src: Moving the package to the /pkg folder

2008-10-06 19:59  mathieu_ribatet

	* DESCRIPTION: Move the package to the r-forge repo

2008-10-06 19:59  mathieu_ribatet

	* ChangeLog: Move the package to the r-forge repo

2008-10-06 19:51  mathieu_ribatet

	* .: re-creating the pkg folder

