7a5eb2c00a13ace941e03cadf69be754 *DESCRIPTION
b968ecade59affacb2bb6cc4ce9c952c *LICENSE.note
af9f1a7c9152ac27553028cabb9f3c14 *NAMESPACE
772912615d7ef5d49f41d52b54906ed5 *NEWS.md
edf2551f0ed3f311569e8850e2736f3f *R/ANN-class.R
15fef0aaad92bda9484322359f3b43ae *R/BRT-class.R
c1d57bbbe1dd2c703cada66b9b4ba6a0 *R/Maxent-class.R
88b38c34ceb4eaf633686f4e0ca760dd *R/Maxnet-class.R
112ba1887e7ebb8abe0d19fac2863694 *R/RF-class.R
804c238b52df7c8252b18c5ef75a25ba *R/RcppExports.R
c12d2cdac1dbba6c3fddd19f03b859d7 *R/SDMmodel-class.R
460e3cad677650d974ce74fd02b2c0f7 *R/SDMmodel2MaxEnt.R
c060acf44705eac44a69bd514f67975f *R/SDMmodelCV-class.R
3e80089726616b9fc421910025b30b92 *R/SDMtune-class.R
0a223c2d752d1cbd192474d64e475b78 *R/SDMtune.R
a9f19b5fba29c8c9e298ec8bf4477c87 *R/SWD-class.R
815775eb38a81e8a2e24c7a6ae2cf389 *R/addSamplesToBg.R
81c82a3f294b4c4aa779c9bebe6d1208 *R/aicc.R
f34d168267ad6f450b16ab12bb27e0d2 *R/auc.R
2823b428edf426d7ca22d25a655cf3e2 *R/chart-utils.R
3ff7658ed109f46d0596a6efc5fab6a8 *R/confMatrix.R
c15c26a57e227d26af2b380d52577671 *R/convertFolds.R
f33afbd4afb61a823fe6dd22785f87c0 *R/corVar.R
64d7d10919324fad5891672f8e9ef879 *R/doJk.R
93e403c34015cd28f11bdfbdb530eb1a *R/gridSearch.R
667d37691728607c92ceb70378ab9c4d *R/maxentTh.R
cb40bbdc800fc3c3b5ecffe9c4549eb0 *R/maxentVarImp.R
8c763475b72467e6198bd010ff1d551e *R/mergeSWD.R
e89c65bec8a39716b7f7071ee95590c0 *R/modelReport.R
885a4b637d7041135eef53daa0af7d6e *R/optimizeModel.R
d3d8051c4a8278bf55c512195d294b0e *R/plotCor.R
f2f2b13c6e96cf9a4506085cd6857208 *R/plotJk.R
051d43d58ab7c85b3c4f32558f8758c9 *R/plotPA.R
46907b452ba28a6a82633ce3cecb1584 *R/plotPred.R
4a93f9fb64b76c4d93f23b46e5e32b3c *R/plotROC.R
be3df55d618338d6717c81b33d9ec380 *R/plotResponse.R
ae3610fe081dadd60670a7aec3684290 *R/plotVarImp.R
dc59f2e767df6609431b0097708a8f6c *R/predict-ANN.R
b7c447f8195681771e1ffb8be331b585 *R/predict-BRT.R
3699769368cea922a3e39e430c0b8fbc *R/predict-Maxent.R
b9d80dac55d309e3867fe277ecbdd434 *R/predict-RF.R
51053d12ce10fda91e92f2c51b75b7bc *R/predict-SDMmodel.R
516d07efbb3426ff1bdc96edd9638006 *R/predict-SDMmodelCV.R
e4ba1ac3ec50a00111e8c2fd77313ee2 *R/prepareSWD.R
1e16884eca655de4bb5cdf757d03a2b5 *R/randomFolds.R
12ae6036825336422c1e353cbb70cb49 *R/randomSearch.R
90c927a99795e585214b57ce29c5585e *R/reduceVar.R
0c3f22f1fcaaea0e6c48f63dca960a77 *R/swd2csv.R
67b89cb1372878f85b3d39fffcd086be *R/sysdata.rda
f3a54d1de2a49c12037f7efc00d5837c *R/thinData.R
259d799fddbb0da84ae7459c635c6570 *R/thresholds.R
08f9cdd0372b58d04f470996aeea9d73 *R/train.R
e297f8f4bf1d7470126e726318e9df65 *R/trainANN.R
b14900ea0f47b503da170bddd5dcf308 *R/trainBRT.R
50c24e1688b247eb09d4363d21ed1214 *R/trainMaxent.R
3562a6952bd4fa9890df182fd2940772 *R/trainMaxnet.R
8db1a0bc8f1b6856a540f1abf479e809 *R/trainRF.R
3ec5d88143767fb682d57dd61a6bc912 *R/trainValTest.R
590e4de895c96ec01c5ec1d30d8c4dc2 *R/tss.R
a2d300c86f2764d0fd6e393258c213a1 *R/utils.R
7599fa1b45dc8808c01121faae5dd426 *R/varImp.R
57b03df5f986dc5e4b0545af8821b5ab *R/varSel.R
77dcfbc8d767daf7c920a1e734ecdd3d *R/virtualSp.R
fbd946b1203dac59bf5b98462dd89056 *R/zzz.R
006ef40af0bafdcdc3b96609556751ef *build/vignette.rds
2a0eb455e134747927417652f2d5c451 *data/virtualSp.rda
bd2a0cfd95be9f828facdff3596d22f0 *inst/CITATION
1436db6701471be8a4b868941fa86032 *inst/WORDLIST
8bb92c350e0823e8e8c774919f2184d1 *inst/doc/SDMtune.R
7508917e14fc53f94f73b7bbfd3055df *inst/doc/SDMtune.Rmd
415f8f9efba3b0163183f209be9171b1 *inst/doc/SDMtune.html
866bd6acc7cf31e7a632cdde27a2db0d *inst/lib/Chart.min.js
a09e13ee94d51c524b7e2a728c7d4039 *inst/lib/jquery.min.js
6cba8b0a54afd74fefa82caabfb60592 *inst/lib/style.css
efe10d7cef0214c3f06c09197bf842a3 *inst/scripts/gridSearch.js
9f61fde853bb4cf9f4f38ffb75c9d6e8 *inst/scripts/optimizeModel.js
eec119c4559c20c2b463bf4afca11efc *inst/scripts/varSelection.js
aa7314d1db4bbd9420e0c300da6e8483 *inst/templates/chart_template.html
818f48ec44e4da1fc88cc403b1a15d78 *inst/templates/modelReport.Rmd
f71b54f1060232f92bd4d33bd3d6afb2 *inst/templates/report.css
3d7e3caa1c5a1f32b9676b4f22c5526f *man/ANN-class.Rd
d22f812ccd141855b70580a92ea7f851 *man/BRT-class.Rd
62d14e6d1a977cb7548ac3a3670e1dd6 *man/Maxent-class.Rd
ea789435433494a17b05e9291d74ff6e *man/Maxnet-class.Rd
dedcede4038327b1d03bb3a565ae9851 *man/RF-class.Rd
bfaa7ed75f27c1dafed1b6603316ae88 *man/SDMmodel-class.Rd
de2942c7ea7336d4c475df8dc37628d1 *man/SDMmodel2MaxEnt.Rd
11f17ed34e7999a3555c04798527729d *man/SDMmodelCV-class.Rd
afb5a0ad212ff6199a90fa397cfb6325 *man/SDMtune-class.Rd
aeca52fe75d123a62cb0cbf73731f0ed *man/SDMtune-pkg.Rd
ccf663eef79e891e22438ab5a6f6eab5 *man/SWD-class.Rd
c7d2e8994990f4db8b5248cdfea77ce0 *man/addSamplesToBg.Rd
58d138dd959008593670ae54dd0062be *man/aicc.Rd
6d8c1d8f497c00d8181bcc1dacab7e16 *man/auc.Rd
d5b3e1f9c2ab56299e03ca91f563a056 *man/confMatrix.Rd
b409235bb77645cd2820f9139236b2b8 *man/corVar.Rd
59232f0d5fbc5dd0a78f813a425aaaa1 *man/doJk.Rd
3fe06652a0f0b4f6981868792c6bae53 *man/figures/bench.png
27439b24c82b1622c180a8a8d8606242 *man/figures/logo.svg
dedfb4915700aded2ba2dc352cc9e7c6 *man/figures/realtime-chart.gif
d11769a9f69f563cb3d66f375162d178 *man/get_tunable_args.Rd
75da80fbc3232f3c83184691ba15b000 *man/gridSearch.Rd
779a0c3a0cd3e6f91e05904ec0f603d7 *man/maxentTh.Rd
5e6da5e683bcbb0134f43e903ef021b9 *man/maxentVarImp.Rd
618d7fcecf927aca62d268bacc62cd2b *man/mergeSWD.Rd
822ff6b7287e2f01e06a53fbe5104b30 *man/modelReport.Rd
bf53c828bd12e0e896c77412d7633ecc *man/optimizeModel.Rd
8dfbd658dda2f73ce26a5d2029e4c696 *man/plot-methods.Rd
d66b7857661694e01e3dac2340521689 *man/plotCor.Rd
5d750965d020584dee56c74dd024fa70 *man/plotJk.Rd
f09606746874c210acddeb124de855f8 *man/plotPA.Rd
1f180718b117854cf37cd8ca46136365 *man/plotPred.Rd
d2545990e83ebcb0f96406fda2c3322b *man/plotROC.Rd
5abb022b4fc8ee931354b97d95942cd3 *man/plotResponse.Rd
1b33ac38efc5fb0a03b8ea16da0c53aa *man/plotVarImp.Rd
f3ebaf945f76f981302108a0f4f0e85b *man/predict-ANN-method.Rd
d4e5fda627f451870e322ad9f30b633a *man/predict-BRT-method.Rd
2c0fd615046e04727aaf4c0734a1429c *man/predict-Maxent-method.Rd
795a78e877c62ec7d9427dd673d469f6 *man/predict-RF-method.Rd
f52384ac09dd8ea5c1741307574fef65 *man/predict-SDMmodel-method.Rd
1eda0dc849d550727d7b82207798db1e *man/predict-SDMmodelCV-method.Rd
ad9dbf62ba3b485aab24e1a6f104fd55 *man/prepareSWD.Rd
03cccf82b578965fdbc425b94d06ee5e *man/randomFolds.Rd
7378206fab40a1ba54684bb1f648a1e4 *man/randomSearch.Rd
43bae443a1539788e0f0f9376ad7162b *man/reduceVar.Rd
974f0f13101302234d66a2d81cff3e2e *man/swd2csv.Rd
ddbbb2e0736fddb0635844ca6b621cc1 *man/thinData.Rd
90c2da6db49e7443f3084f8f67a1d79f *man/thresholds.Rd
95ea906a6b63d363d13e8a01939b4716 *man/train.Rd
7c21dd329f1b1edbf9f00ade62564f10 *man/trainValTest.Rd
6df05fa6a6d17e0a71d21eb6eed78c54 *man/tss.Rd
94f6738eb796aba630392ce089b8f380 *man/varImp.Rd
09a70b2d6cc6f03941024c488ea8f909 *man/varSel.Rd
ab43eaa848fb5f4da71861fd75bb7dd3 *man/virtualSp.Rd
50f25abf53ca928e615f0726287ffbcc *src/RcppExports.cpp
661786fba3985c734bf3792a17012dac *src/utils.cpp
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
43f3accf6aa33885d3727b3f406c75c0 *tests/testthat.R
13d1a4f76129321b19c2eebc13bcd174 *tests/testthat/test-ANN-class.R
8763d405007c3583a889e6e4bc4aa7b8 *tests/testthat/test-BRT-class.R
379916649bae42d87eed36536f7ab92a *tests/testthat/test-Maxent-class.R
975aff2aba123217d14adaa59bb1470b *tests/testthat/test-Maxnet-class.R
e1bbbce52f9b8b3909f5ea20b559ec2c *tests/testthat/test-RF-class.R
ffacfa7a725dec41eab302e549e90b6d *tests/testthat/test-SDMmodel-class.R
bb90b761ee64d5976efcb255811babce *tests/testthat/test-SDMmodel2MaxEnt.R
be85365a34da7f73fd65ab9607bcfbd4 *tests/testthat/test-SDMmodelCV-class.R
32867a7e16cfd5b4d4aac6ad22d504f3 *tests/testthat/test-SDMtune-class.R
45241b25f43baf7ba20298778343cc02 *tests/testthat/test-SWD-class.R
b5adae1d2d562af8b09892b73ab6ae6f *tests/testthat/test-addSamplesToBg.R
eb6297c8713b6b62d6c876ca527309f4 *tests/testthat/test-aicc.R
7e54e13cbc32baa972b3d216552bee9e *tests/testthat/test-auc.R
ed006a134e5251fff62e731e6933e8e1 *tests/testthat/test-chart-utils.R
1c2e5c80dc11e7a81cc4fd0e34c41a86 *tests/testthat/test-clamp.R
4a3f9e809d2d058e88bb0b495ff0458b *tests/testthat/test-confMatrix.R
91a213025878f5712856824420df584a *tests/testthat/test-convertFolds.R
84939415eb78457bd8689e58eb41ce4b *tests/testthat/test-corVar.R
892a8099142581f1d705e2fa1d03b46b *tests/testthat/test-doJk.R
464096811e387af5781a69f11103bc38 *tests/testthat/test-gridSearch.R
3e98e36067aac19b2027c92337e3f964 *tests/testthat/test-maxentTh.R
2068d6b5770d90657ed86c7dadd26536 *tests/testthat/test-maxentVarImp.R
0c202b401e04baf1608fdb158f5cf341 *tests/testthat/test-mergeSWD.R
6cadb2ce990bc3c62894169a6e9c0421 *tests/testthat/test-modelReport.R
c72eaa094bb3606d9f4e10e55ae08178 *tests/testthat/test-optimizeModel.R
114c9b01cae11efce092242a57a430ff *tests/testthat/test-plotCor.R
724a91a2b39483e11222f3e202fb1496 *tests/testthat/test-plotJk.R
0403ba0c7b33030cb7397b8c52621c12 *tests/testthat/test-plotPA.R
c62a4702633cb4fcee70d54cc1b35b59 *tests/testthat/test-plotPred.R
0c8ce515745b4d35c7e0ae76902829e7 *tests/testthat/test-plotROC.R
123a576cca7621693f210993241045d5 *tests/testthat/test-plotResponse.R
e5a334c1e871d40227021df235963b2e *tests/testthat/test-plotVarImp.R
a56800180b8f0d47890524ce6e0b6cab *tests/testthat/test-predict-ANN.R
c4d6d54271d44a22e5ed17f57a1d88f0 *tests/testthat/test-predict-BRT.R
a753f489a6c9f8554a239e92fec68def *tests/testthat/test-predict-RF.R
6f722b2ad130bef64c093f65a4eeb89b *tests/testthat/test-predict-SDMmodel.R
f785872b3a26444d872b0d2ee25d2a83 *tests/testthat/test-predict-SDMmodelCV.R
b2b79c8d866a67a0dcaf410c7d11981e *tests/testthat/test-predict-maxent.R
ef0c3d381c945fa9e031d768fef6a142 *tests/testthat/test-prepareSWD.R
b93d7d1a1ffb5022896c033cef443faa *tests/testthat/test-randomFolds.R
ed061c58db196d7e4952c144a50474d5 *tests/testthat/test-randomSearch.R
c5122497f238a9697a996b1ed13a156a *tests/testthat/test-reduceVar.R
f286e82c6965cac8a946c72ae404fb5e *tests/testthat/test-swd2csv.R
5e4187108b9ac466c5d4e42fd94d1f9d *tests/testthat/test-thinData.R
de3e09e4434c522cecdf86ced2cba7f3 *tests/testthat/test-thresholds.R
556da4da22ef91891cbf7d2f61a5d08f *tests/testthat/test-train.R
6990817e57fddaa02e98a272acbe8c65 *tests/testthat/test-trainANN.R
95925d03339e2467263160271f79b7d7 *tests/testthat/test-trainBRT.R
e0ce959be04ec6e339856b4df8ec92e6 *tests/testthat/test-trainMaxent.R
5682be15d055d832f1ff22756cbe07fa *tests/testthat/test-trainMaxnet.R
93b8fc8715b45364e483dcc6a62eadde *tests/testthat/test-trainRF.R
2825399e5d01da9b8ee21072c89e7513 *tests/testthat/test-trainValTest.R
d17f4d169da138f5c2cf02fb0f42378c *tests/testthat/test-tss.R
b446eed5ba0e9f1a814508681f75e348 *tests/testthat/test-utils.R
6b7db47d1ad6fa06b1f6d0899f4d1960 *tests/testthat/test-varImp.R
174c87d85688498482ad9a6a44b5b1a3 *tests/testthat/test-varSel.R
7508917e14fc53f94f73b7bbfd3055df *vignettes/SDMtune.Rmd
c997d689766be2f4bfb452c6c4e4c6b2 *vignettes/SDMtune.bib
0fc27bd19a3d7ac4af4425874290951d *vignettes/articles/evaluate-model.Rmd
7d9001b9cd8e3c44d548cde67d86091e *vignettes/articles/evaluation-strategies.Rmd
cb1428c203209b7ad239c8aaa60ba405 *vignettes/articles/make-predictions.Rmd
461bc73069ee39915ee023460d6da799 *vignettes/articles/prepare-data.Rmd
4333a35d76a4799535a02bdf13ea14c1 *vignettes/articles/train-model.Rmd
66012579a4b190537cd7c757650bd6f2 *vignettes/articles/train-tune-presence-absence-models.Rmd
7e86855f6ddeffd3142567a98d51f239 *vignettes/articles/tune-hyperparameters.Rmd
5c50f0104eb8f8bfef4a85a035c2e4b9 *vignettes/articles/variable-importance.Rmd
a312e41da2e7e4eda04e28e82d6f4f34 *vignettes/articles/variable-selection.Rmd
