# Generated by roxygen2: do not edit by hand

export(apply.quant.scale)
export(apply.scale)
export(apply_quantile_scale)
export(apply_uniform_scale)
export(correlation.distance)
export(correlation_distance)
export(draw.trajectory.heatmap)
export(draw.trajectory.plot)
export(draw_trajectory_heatmap)
export(draw_trajectory_plot)
export(euclidean.distance)
export(euclidean_distance)
export(evaluate.dim.red)
export(evaluate.trajectory)
export(evaluate_dim_red)
export(evaluate_trajectory)
export(extract.modules)
export(extract_modules)
export(gene.importances)
export(gene_importances)
export(generate.dataset)
export(generate_dataset)
export(infer.initial.trajectory)
export(infer.trajectory)
export(infer_initial_trajectory)
export(infer_trajectory)
export(knn)
export(knn.distances)
export(knn_distances)
export(outlier.filter)
export(outlier_filter)
export(outlierness)
export(quant.scale)
export(reduce.dimensionality)
export(reduce.dimensionality.landmarked)
export(reduce_dimensionality)
export(reduce_dimensionality_landmarked)
export(rescale.and.center)
export(reverse.trajectory)
export(reverse_trajectory)
export(scale_quantile)
export(scale_uniform)
import(dplyr)
import(ggplot2)
importFrom(MASS,kde2d)
importFrom(RColorBrewer,brewer.pal)
importFrom(TSP,TSP)
importFrom(TSP,insert_dummy)
importFrom(TSP,solve_TSP)
importFrom(fitdistrplus,fitdist)
importFrom(grDevices,hcl)
importFrom(magrittr,"%$%")
importFrom(magrittr,"%<>%")
importFrom(mclust,Mclust)
importFrom(pbapply,pblapply)
importFrom(pheatmap,pheatmap)
importFrom(princurve,principal.curve)
importFrom(purrr,"%>%")
importFrom(purrr,keep)
importFrom(purrr,map)
importFrom(purrr,map_chr)
importFrom(purrr,map_dbl)
importFrom(purrr,map_df)
importFrom(purrr,map_int)
importFrom(purrr,map_lgl)
importFrom(ranger,ranger)
importFrom(reshape2,melt)
importFrom(splines,ns)
importFrom(stats,as.dist)
importFrom(stats,cmdscale)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,kmeans)
importFrom(stats,poly)
importFrom(stats,quantile)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,setNames)
importFrom(tidyr,gather)
importFrom(tidyr,spread)
importFrom(utils,head)
useDynLib(SCORPIUS)
