cf93e1fb54b85db1307a4f527c5b25a1 *DESCRIPTION
efa7d6951b9a09c39e4383757a8a6bc0 *NAMESPACE
57cd59963f6c625ab44b00401e0d0a43 *NEWS
154d0ea0f1ecb0ff1b83df81c2ff259b *R/ReporterScore-package.R
b7788b8cdc053060f351063f664d76e3 *R/calculation.R
c123e9dc9d0c9fe84aa5090c5706f1c5 *R/check_files.R
a0d294e4542156b186ec2f82530ac32a *R/data.R
e375395db9a95e802e6382ae46a8db79 *R/enrichment.R
d5fdac34428f54c378830ef04b2df6c0 *R/plot.R
453fd3307f06fd476923d4be7949be25 *R/utils-pipe.R
2444eb7e7876ebe9758642565070136b *build/vignette.rds
c3e6392599368e00cfb95473499bdc54 *data/CPDlist.rda
1f19ba4a12bdb8e7f5ed49b8423ff5b6 *data/KO_abundance_test.rda
ae8d3b9980898fefe27784d006be26cd *data/KO_htable.rda
17ee3548077d59e0cf5327182e8af9be *data/KOlist.rda
4a2382a1a8ce6780486412137cd60134 *data/Module_htable.rda
09c4d65af39199faedfc9acba5353d88 *data/Pathway_htable.rda
39e1df3fa4a1265b6684bf4cc08c7592 *data/datalist
df5afdb9849e088a2ec0789c8a958017 *data/genedf.rda
866565e602c30df01d68bde37523a3a3 *data/hsa_kegg_pathway.rda
9cfbf2ba94537d879a95ae7b8301aee3 *data/mmu_kegg_pathway.rda
5c7ff7ea6797db1efd833fd30dc76cfd *data/reporter_score_res.rda
78cfb1d66caed9ee30aaadf9f9e02657 *inst/CITATION
94871f7ee623b5b935942d95b34b399e *inst/doc/ReporterScore.R
e58592c16cf140e0bfd0904b4493347d *inst/doc/ReporterScore.Rmd
0cc00c00fe9410ba30b9b8f92ad97ebc *inst/doc/ReporterScore.html
065fa292004508c3cf11a72a9920519d *man/CPDlist.Rd
a7352e46550d03e7a38886004842d3ed *man/GOlist.Rd
4792ffa1491c4652c71a5e8c27cb34a2 *man/KO_abundance.Rd
6e2786fa77aa43b667a4ec0c5d02d0bd *man/KO_enrich.Rd
b34405f4f418604e06a843092f360cc9 *man/KO_gsa.Rd
f7a1d275003059cec7ba698a384f6cbd *man/KO_htable.Rd
2677d42b60d66f9fe213b22ca0555ca5 *man/KOlist.Rd
26824f58ec818d838da5fda864370083 *man/Module_htable.Rd
9067253eb8dbe01b6c371c837d31537f *man/Pathway_htable.Rd
e107a0b57a1133862132d457183c5c09 *man/RSA_by_cm.Rd
93b6b8afea2cec764dc2df3aa92b6530 *man/ReporterScore-package.Rd
677fc8fc52ad36a0bffc1b5cf4fd51dd *man/c_means.Rd
2b9abe296118b3652cc5b99f3f09042c *man/custom_modulelist.Rd
1ab371c6de7636d17d0a0a13e60acc8a *man/custom_modulelist_from_org.Rd
0c15a687e408ab3b67d3e583e4b2ba19 *man/gene2ko.Rd
7979003ecb9b25b3c025ce9e8cac4a74 *man/genedf.Rd
bb4453aba26a9b8e92ddd7c42139cc7b *man/get_features.Rd
031e7aad66b83e6699fe03475cca1208 *man/get_reporter_score.Rd
424fcb48ee844da349fc0707d9ecd207 *man/hsa_kegg_pathway.Rd
535d6019712a5908f65850791aa33075 *man/ko.test.Rd
af4ad4c4946feb3e188431a4dc4179e9 *man/load_CARDinfo.Rd
74c30906925c17dc4d4ab49711bcf41c *man/load_GOlist.Rd
3cce6278cf278ff53b2686f80cefc79c *man/load_htable.Rd
d0f75e47736b23eb7d09bb745b8f3840 *man/mmu_kegg_pathway.Rd
133b03e68645278a93a173903fb2bc15 *man/modify_description.Rd
5699ff1186174443299c71981b08c311 *man/pipe.Rd
1d7e210e66c90b2be1a54f574c441d5c *man/plot.cm_res.Rd
21d2bd9a05231138e58b9063e958a659 *man/plot_KEGG_map.Rd
f47abfba5aca093ce683cf302c63665a *man/plot_enrich_res.Rd
bc5aa4a16abe55e7b17c7aa36dad19e8 *man/plot_features_box.Rd
937056f4a8702380f96d9227a72805ff *man/plot_features_distribution.Rd
c6a346ce8c15753e894393a74c335f76 *man/plot_features_heatmap.Rd
0e6f9d821c2a7d13c2ef852d7edf19f4 *man/plot_features_in_pathway.Rd
b40c55307a7673d942e8d4dfca7ed95f *man/plot_htable.Rd
5657c37f198616999e04d16a4ab0118c *man/plot_report.Rd
9fd4f7b2b085c0abbca7d3854b003af0 *man/plot_report_circle_packing.Rd
e1113630f36b051b049b36765c9a036f *man/plot_significance.Rd
fdc6f4c225003283e1b11927bc824f56 *man/print.reporter_score.Rd
0bd3719a27045dada861779353ca0b78 *man/print.rs_by_cm.Rd
aa16498f3ba265f71c5d14f99cc893bd *man/pvalue2zs.Rd
29cbda62d07e617090847c3aab9c5073 *man/reporter_score.Rd
426a690572adf2239a01d1eb1c9a81aa *man/reporter_score_res.Rd
a8db51e0a019a5bc3c973351e3d08383 *man/up_level_KO.Rd
7f16f449c69f0b8e2874c79a2dddba17 *man/update_CARDinfo.Rd
cc862743b24c7c07084c724ea61a4cdd *man/update_GOlist.Rd
6de10949e0ce8be0573496d02445ae7e *man/update_KEGG.Rd
e58592c16cf140e0bfd0904b4493347d *vignettes/ReporterScore.Rmd
