# Generated by roxygen2: do not edit by hand

export(ASExons)
export(CreateOutput)
export(DataProcessing)
export(ExonTesting)
export(ExpressionLevelPlot)
export(FIRMAScores)
export(JunInfo)
export(PivotTransformData)
export(REIDSFunction)
export(REIDSFunction_HPCVersion)
export(REIDSJunctionAssessment_HPCVersion)
export(REIDS_Analysis)
export(REIDS_IsoformAssesment)
export(REIDS_JunctionAssesment)
export(REIDSmodel_intern)
export(REMAP_SplitProbeSets)
export(SpliceIndex)
export(TranscriptsPlot)
export(iniREIDS)
export(reidsfunction_genebygene)
import(GenomeGraphs)
import(aroma.core)
import(biomaRt)
importFrom(MCMCpack,riwish)
importFrom(RColorBrewer,brewer.pal)
importFrom(aroma.affymetrix,AffymetrixCdfFile)
importFrom(aroma.affymetrix,AffymetrixCelSet)
importFrom(aroma.affymetrix,ExonRmaPlm)
importFrom(aroma.affymetrix,FirmaModel)
importFrom(aroma.affymetrix,QuantileNormalization)
importFrom(aroma.affymetrix,RmaBackgroundCorrection)
importFrom(aroma.affymetrix,extractDataFrame)
importFrom(aroma.affymetrix,getCdf)
importFrom(aroma.affymetrix,getCellIndices)
importFrom(aroma.affymetrix,getChipEffectSet)
importFrom(aroma.affymetrix,getData)
importFrom(aroma.affymetrix,getFirmaScores)
importFrom(aroma.affymetrix,setCdf)
importFrom(aroma.affymetrix,writeCdf)
importFrom(data.table,rbindlist)
importFrom(lmtest,lrtest)
importFrom(methods,hasArg)
