42a3f2d73a81c2289c2b57faaa2ad748 *ChangeLog
e105c5afa2955ebb9acc3d70a6cb4bce *DESCRIPTION
15658e9f52803d9bedbc22c0cb43069f *LICENSE
7594fbf7872f0a674c676dac29560dc4 *NAMESPACE
40044db2c9cbaa10167c9510d45598a4 *NEWS
bd5ef6d1912b195b8fe17aa83481b689 *R/assist.ado.R
b11967dc9a3fb19ff78d96b0b79d6768 *R/assist_NB.R
a7b4241f8a5bf14a7da7e3668c7eda85 *R/core.R
800315bc273ce9cfecc5eb146c98d316 *R/dissim_functions_plot.R
6f9ab440c30829c13e2c90036c981385 *R/group.Taxa.R
942d65db2d60cccbe19524f228422fda *R/group_CLUST.R
10750dab94aefa005938bffe0d422273 *R/internal_functions.R
78baaaf71ff955694fc3f0aeef0f54f5 *R/metadata.R
c06f20da4559e9a9dae9b74bc785c89d *R/network.R
178f29fb6ac1115e2177956648017327 *R/ordination_functions.R
53484831a14fe66ef1675d51bc772691 *R/phylo_taxonomy.R
f472c67cf9fecf3aa68c2b238d844757 *R/plot_heatmaps.R
3d5b9661a9ab5acda0a4ff38001e6aef *R/plot_misc.R
48341714f778d689f3db50bd6e23bb83 *R/process_data.R
42cc0e5a5dcfb57ae8dc9faf56bb3185 *R/read_and_write_files.R
b05e918f621ea3ec61be2adfa6fed242 *R/seq_var.R
54d33ab727b1170bb0a53b5481343f94 *R/summary.R
0c43b2e344bd2d09115e9c36a65686ac *R/taxonomy_functions.R
29ccecefa91a358ead2428fae447ba40 *R/theme_ggplot.R
7f5eb78f90fb6fcba54c0928c2b2152c *R/utility_function.R
278c892323825465270dce36fa3162cc *R/validation_functions.R
7c8f8ce1351aa6fa460f243edbbeda7f *build/RAM.pdf
8a702020b7bde53c9a42d3146858fcb8 *data/ITS1.RData
13ad7e9a1b3e639eeac751f1fb74aa30 *data/ITS2.RData
e94366424aefe9da6e99c461c9abfbfb *data/alignment.RData
e1238ea72e3f23ab1d0707a7ebe34392 *data/meta.RData
9f7703fc71c327d6ce71386fd4042320 *inst/CITATION
d61e8259e4b2f38c3447de2b2dfdc19c *inst/extdata/map.fortify.list.RData
6d2a09472d7996981a9d83c11a49e27a *man/ITS1_and_ITS2.Rd
286a7c3eb2c6667ae611fc1df7e1934a *man/LCA.OTU.Rd
addfdafa19373e67bc12fa35627534f2 *man/META.clust.Rd
609df5c447b077dc2d181ca03b431ef9 *man/OTU.diversity.Rd
6908f12d1213eb2849232fcae1908331 *man/OTU.ord.Rd
1f1228fd10098f0f180f8f1a4f134f40 *man/OTU.rarefy.Rd
c0ab850bc4080b349525a0e8ff522f37 *man/OTU.recap.Rd
c17ece9d40eae73aaed09f9c0284a997 *man/OTU.subsets.Rd
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7cb84890f7d27e478c8c44d1ac97cc34 *man/RAM.factors.Rd
486803a9fa5e4edf8a11d353d3226666 *man/RAM.input.formatting.Rd
c374d6a133c7c5c923034e56f5192446 *man/RAM.pal.Rd
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5195ac8e7d4e0733342e6463bedcafb0 *man/RAM.rank.formatting.Rd
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51c787df73b4502e2f03704a3797b671 *man/alignment.Rd
8d614c58ad012864558fc66d16c676d1 *man/assist.NB.Rd
55501a669882193501bb9500060d65d9 *man/assist.ado.Rd
8c584503fd2495ff2ac8fe75f69cbc89 *man/assist.ordination.Rd
1d6d3364bbb168d1cfd8a73ffdcb1a7a *man/col.splitup.Rd
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7ffa8235de5a2887bc4062bd976a9e06 *man/core.OTU.Rd
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92536372d0e2e007d8960c539159eb38 *man/core.Taxa.Rd
266be967dbb24d6fea3f664b0acc6445 *man/correlation.Rd
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855c38a13dd6a0eed44ec9c9a32914ca *man/data.revamp.Rd
0bdd2d1f0ef127b5322d5aae75851dac *man/dissim.Rd
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9c84baa3ee6acb6857d500d57045d5fd *man/dissim.plot.Rd
c70865cd0faacb1cf386fe3ce9fe3219 *man/diversity.indices.Rd
a18c984b0049c9e8a570bef2a0092e29 *man/envis.NB.Rd
059646e561a3f3724d9c2609b59d6ee9 *man/factor.abundance.Rd
4c554f6969157e12cbd345f8b047a887 *man/filter.META.Rd
a1e023f59cd7322bc965c402f6727588 *man/filter.OTU.Rd
67c153ebbb92fb2415cd7657cd1ff5b4 *man/filter.Taxa.Rd
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8c7adf5d271fe82bfa974b4bbab11ce2 *man/fread.meta.Rd
8298037704048d4e174c2cc12c66e524 *man/get.rank.Rd
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fa6f5bf1a8f037d1138d08476dac480a *man/group.Taxa.bar.Rd
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6e8e92bd72b935665751dd0234007942 *man/group.heatmap.simple.Rd
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960fe0fea17b5a88d0253648a39cb60d *man/group.spec.Rd
a37ca5026a7527ac003a7214c3ac7a7f *man/group.temporal.Rd
2e524fa5107c3db94ac3c601982427d2 *man/group.venn.Rd
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5ca3877560b29dcc0a694f1009fee399 *man/match.data.Rd
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3fb77ebd31ff6b35c06fb39cad981e67 *man/pcoa.plot.Rd
7ec3e4c264e654802e19d2830c4d097b *man/percent.classified.Rd
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15b6bac52b416f2d29e96b6a8c846341 *man/phylog_taxonomy.Rd
285b348c895af2ae19583df14e58cd52 *man/read.OTU.Rd
6abdaabffa10ad3cf00274652914cc66 *man/read.meta.Rd
364a4296c687cfa87917d1ac2bd1c842 *man/reset.META.Rd
a0c333ff25df9cab4a8b96f224087554 *man/sample.locations.Rd
3e01af429f5b4dfbe318d1e2f9870daa *man/sample.map.Rd
f6a23903a05a72d665d60a61a5b29442 *man/sample.sites.Rd
b56ec28fe78604fcf7f0916b2ff22bb1 *man/seq_var.Rd
261823ec224169204513d62f11b84a48 *man/shared.OTU.Rd
15a9fae9ca257730a4820eb79e050cbb *man/shared.Taxa.Rd
932f5334a0ecbf49a239a3e6c3150e95 *man/tax.abund.Rd
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9cf4925086d56248d4d87908eefbf3f1 *man/theme_ggplot.Rd
54cc2794d4d24bdcdb77948d38fdaa07 *man/top.groups.plot.Rd
52b888b8275de5f412591088952ccaa2 *man/transpose.LCA.Rd
43bb655123341e8b1f5d6793738790ac *man/transpose.OTU.Rd
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af36be0466117ff60b56e50666210f82 *man/valid.taxonomy.Rd
033ca330319e88650176b3e52f51d990 *man/write.data.Rd
