2553337cccde33b47098ccef25dc3742 *DESCRIPTION
c4bea1c008904272dbce158ebcada79b *LICENSE
eec2d8a66b15c568fc0baa13bd90e8b3 *NAMESPACE
7517c6cb6a994a93ce8e0d7a0f4b27d0 *R/extract_modification.R
935654e689a2262d973e8f284f0aa77f *R/peptide_cluster_quantification.R
5e9fe1609d3fa5ad4da025306995611e *R/peptide_plot.R
ab01564e757597f838b865f39b3785fb *R/read_file.R
6390f0a7d3127d8ec8ff44963aef4456 *R/sequence_matching_functions.R
c7e27e1d1164fa6472b9518e0f5ec7fb *R/strip_sequence.R
000f108518ff6b8af2da7aebe491d15f *README.md
1cda7c4794970f2ddec6c6440827ddeb *build/vignette.rds
8cf9ca8259ca358d889dc60a17c0d8df *inst/doc/PepMapViz.R
10baafb6e6adb100d89bf146a4cd108c *inst/doc/PepMapViz.Rmd
662d608215087ab3b6325eefdc326b59 *inst/doc/PepMapViz.html
4e8c0af2fcd3c46335be021d4a513b80 *inst/extdata/PEAKS_example.csv
48296ddbeda19338c0577afcefd8dd72 *man/calculate_Area.Rd
a8120fc968d90a6ec9a46eba177825f6 *man/calculate_PSM.Rd
7045ae89d48f941fb43a8ede82868873 *man/calculate_all_Area.Rd
6ac3ab5afeebcf07a100eb698255c411 *man/calculate_all_PSM.Rd
b649eb34d8daa2777c781a0bb187dab4 *man/combine_files_from_folder.Rd
6c46af668169a7ddc7f477c63295378b *man/convert_to_regex_pattern.Rd
f927453c6ef3ed5ad3d919f41102ea8e *man/create_peptide_plot.Rd
def1868e71f13f93eef3d564995361a3 *man/match_and_calculate_positions.Rd
94f7e23664158c4e4b6e8b644f6d4f00 *man/obtain_mod.Rd
da50e4dd900cf3c1b22226238c7ddc95 *man/obtain_mod_Comet.Rd
15cf3515a53aabf0475a880b6b2d9f0c *man/obtain_mod_DIANN.Rd
2d56ea9f4cd8e191befcc4ae561ce795 *man/obtain_mod_MSFragger.Rd
cfb9e30699bd98801fc83c691c5f0c6e *man/obtain_mod_Maxquant.Rd
5ebd0adf26059236fdd6161e936a2b09 *man/obtain_mod_PEAKS.Rd
16ba901fd5512ed8290fa3604b9aab83 *man/obtain_mod_Skyline.Rd
6dc3cc96ba9287bad80082c83d808745 *man/obtain_mod_Spectronaut.Rd
a4a3e70ff30e6d622a3cb9288848ee0b *man/peptide_quantification.Rd
89c4205186d4779c2a93709266035567 *man/strip_sequence.Rd
f556c2615208ad498a98eacdd1fa5ac7 *man/strip_sequence_Comet.Rd
038f3512ded91333e67b6fd30331a390 *man/strip_sequence_DIANN.Rd
47436138e4f05d865206e35befba62a3 *man/strip_sequence_MSFragger.Rd
d938a22b94296a0e35ac4589010cb8e2 *man/strip_sequence_Maxquant.Rd
a1ec49f890e5890f72ee9305d8c7ffee *man/strip_sequence_PEAKS.Rd
9146c362a670cbdd1071c68b5ca2964b *man/strip_sequence_Skyline.Rd
941fe5a8e27fe1548f9eb66d3ca3edfd *man/strip_sequence_Spectronaut.Rd
b3cc214f5c84eb61a2f639dbb5fc8671 *tests/testthat.R
57afaec65420e12bf17b550c98f786bf *tests/testthat/test_obtain_mod.R
5f07fa8615a99fbd344b9040a5e46793 *tests/testthat/test_peptide_quantification.R
4ba2b4d3759d07b4ab0eb16800eaf4a1 *tests/testthat/test_sequence_match.R
fbc11dafb726e36e3a957fa9a6629025 *tests/testthat/test_strip_sequence.R
10baafb6e6adb100d89bf146a4cd108c *vignettes/PepMapViz.Rmd
