ape, nloptr, numDeriv, SparseM, corpcor, lattice, akima,
grDevices
ape, nloptr, numDeriv, SparseM, corpcor, lattice, akima,
grDevices, phytools, phangorn
ape, nloptr, numDeriv, SparseM, corpcor, lattice
ape, nloptr, numDeriv, corpcor, lattice, akima, grDevices,
phytools, phangorn
ape, nloptr, numDeriv, corpcor, lattice, grDevices, phytools,
phangorn
R (>= 3.2.0), ape, nloptr, lattice, grDevices
R (>= 3.2.0), ape, nloptr, lattice, grDevices, geiger
R (>= 3.2.0), ape, corpcor, nloptr, geiger, RColorBrewer
numDeriv, corpcor, lattice, grDevices, phytools, phangorn
numDeriv, corpcor, lattice, grDevices, phytools, phangorn,
stats
numDeriv, corpcor, lattice, grDevices, phytools, phangorn,
stats, expm, corHMM, Rmpfr
numDeriv, corpcor, phytools, paleotree, phangorn, stats, expm,
corHMM, Rmpfr
igraph, numDeriv, phytools, paleotree, phangorn, stats, lhs,
interp, grDevices, parallel
igraph, numDeriv, phytools, paleotree, phangorn, stats, lhs,
interp, grDevices, parallel, phylolm