85051657d7106aa9037fa591fa0546e2 *DESCRIPTION
cd4497a762047ec2d2fa82b2c580046f *NAMESPACE
c0cd4e862320ad464f973794141fed90 *NEWS.md
2ba5c0355a1308adb13e769ccda23dce *R/Ancillary_Indicators.R
e7924c0158ea2334873bfc005506679d *R/Awatea2OM.R
e0b355bbdfd5a5a4e85fdf8476694a22 *R/CASAL2OM.R
5455334f646f0dd6bee2a540a4a3f483 *R/HCRs.R
58ade2859ff279fa0e5e3829e77b06fd *R/MMSE_Object.R
464e5799d8f358b1539e9902698a85f8 *R/MMSE_plots.R
0c92ec4dd72acd793e241fd7b266645e *R/MOM_functions.R
498642f8ef47a1498cf40d71becc9f5d *R/MOM_object.R
27a4112aba3c5d0b52f77d135aed55a3 *R/MOM_plots.R
07c83f0f95e318a971a5b7e88da0a826 *R/MSEtool-package.R
63c390e34dca0198be0554ce78326d97 *R/Misc_fun.R
bc27028c6125ebb10f297bb58167ef5d *R/Movement_calcs.R
ed4495f413a473260e86abdbde29b44f *R/SRA_scope.R
70a761757f033d630f4061f76fa722f4 *R/SRA_scope_data.R
f89dfc08bbfcac614efb2b74862278f8 *R/SRA_scope_rmd.R
ed1c247d2f2848c4d1d5abe491098de7 *R/SS2Data.R
00f1ebc1a108acebce042f101166631f *R/SS2OM.R
17ef365e5edea044036ad3913e9ec011 *R/Single_stock_multi_q_REDUNDANT.R
d1c1fa09fefd6ae77dde9f11bec094f4 *R/applyMMP.R
71fc4b02f98bc65a09fa20ac0ae01a83 *R/assess_DD.R
4feb94541f35f28c2dede9fc4f247134 *R/assess_SCA.R
87e2679b6fbe8c249fbe96b75a9c25f4 *R/assess_SCA2.R
46b99ca7c406b167896c49a2106da055 *R/assess_SCA_Pope.R
de118f8bcb207d4aec8fc82690e22c42 *R/assess_SP.R
4e9a940644dd29a64195252f128a6fab *R/assess_VPA.R
fc5ee44d5f68cfcca98b02efa295a926 *R/assess_cDD.R
641a0b4c2343489a0fd83c955546b6cf *R/define_S4_class_SRA.R
5d314ef963f658a2f348c98ffe3b8852 *R/define_S4_class_assess.R
2162c5f619810667350a83916c4b2ade *R/define_S4_class_profile.R
c4d20fc34328387827dab54f0375cf22 *R/define_S4_class_retro.R
ee3614cbd52e110c5d45d116625e6f4e *R/diagnostic_AM.R
3c52d89a3af9b346e1ccbe55cc587991 *R/document_data.R
9c39cb427e193a3c129edff04af2143d *R/iSCAM2OM.R
fc398226e00e815b4efae713d306fdc4 *R/multiMSE.R
74364946f07d2e1ed89cb503d51f8f66 *R/multiMSE_internal.R
35e12140533c1e1266689bf904c37d5c *R/multi_q_estimation.R
8b5d4331b59e78a02cea94b6db789f71 *R/popdyn_MICE.R
aa4660a9580bc26ba1b690aceb568055 *R/report_DD_TMB.R
34379bfae699766520be1a799d924aea *R/report_SCA.R
d7fe531994323446026a960bb36bc872 *R/report_SCA_Pope.R
2e3e1e1d0ce880ef2a1bc2e74ce11dbf *R/report_SP.R
6da9a2d3ecfa27c3cd3bfe28b8ee8339 *R/report_VPA.R
0c604963f41a4b56c5717147344a6d3d *R/report_auxiliary.R
1abf569a61139aab45105d12225025e6 *R/report_cDD.R
1fc156cba5a8023662b2b3b6b64a77ac *R/report_spict.R
5db3f1903c0d4a5368a540e9dec1e540 *R/retrospective_AM.R
f2d859bca0758e949f12650b09eab7fa *R/rmd_report.R
08e2aa0218e7b1036e71d4ae1422847c *R/z_MPs.R
a742cbd6ef02f32471bfd90056543195 *README.md
7f9664c10ace2ccc3075527331fb4da8 *build/vignette.rds
c7d33e89dc0f107d9740270425b34883 *data/Albacore_TwoFleet.rda
b3517ffc22136495cbea0d8ecaecaae5 *data/swordfish.rda
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a981d8e8dcd5f9299c849f3d213ac0ba *inst/include/cDD.h
1500d50f06967c02938cb6a356539ba0 *inst/include/cDD_SS.h
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0a30b6cbbdfea053f20da217056a80d9 *inst/include/grav.h
efde0468731975169fb75eae26067c51 *inst/include/grav_Pbyarea.h
e17b4a481c721ceb814c0f75bd9c7fb2 *inst/include/ns/ns_SCA.h
cb95e8e9eb2f5d7b6b4e8448fbb14a6d *inst/include/ns/ns_SRA_scope.h
110517cb9f1aa8700f94d6cfd0d5d3d8 *inst/include/ns/ns_VPA.h
80d28a682e71fd42a65c99b795132177 *inst/include/ns/ns_cDD.h
d23b521b747248780a2c92948bf56da0 *man/Albacore_TwoFleet.Rd
5479d6fc555b038b5178e3f9cb25efc9 *man/Assessment-class.Rd
504cc92b30fcb9c79322e8e7e0f0de18 *man/Awatea2OM.Rd
9fc27549a60cbbbf69b48573661e232c *man/CASAL2OM.Rd
3884f52f49a3224974c89491f7794474 *man/CASALpars.Rd
f67d52afb9cc818b3824b84cc6d875c5 *man/DD_TMB.Rd
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5d82ba050eec68367c433ef47c3c5df9 *man/HCR_FB.Rd
46fea0fc94c8fc1a5bec4b0c7818ae32 *man/HCR_MSY.Rd
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c2da94403c207b5ac2671a71a3f5c653 *man/HCRlin.Rd
482dceeb8964156f964ae0174513a494 *man/HistMICE.Rd
7dfde1958520a8ceea5a2ffcad471c87 *man/MMSE-class.Rd
d059fbd2732c9cf804f61f4bec4b024b *man/MOM-class.Rd
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22ace8b2e8d122091cbe58ea95745e98 *man/NIL.Rd
8c079ea63d6d8b0a8edbb8e71e62ad82 *man/PRBcalc.Rd
13b1fcefdf6a8ac72b525cec8af0648f *man/Probs.Rd
24f3f42ab96394156d0845beeded8251 *man/ResFromRel.Rd
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7eda41819803e487fbbd31cc84c9b4c1 *man/SIL.Rd
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a49a6c227863cc590c1c21187768567b *man/getinds.Rd
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4b101e9396c2991397b63f7b52234834 *man/getq_multi.Rd
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0c8fbbb0201d8e9a3dadac634fc19e3d *man/mahplot.Rd
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00d24ac1e53c1ad3185c0590377d1fa5 *man/multiData.Rd
00e9f1b0d6ca75c320697ac9d3241e11 *man/multiDataS.Rd
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ead4e6a378b902eb3aa0f9cb1ecb6336 *man/plotquant.Rd
32dfd0adc2bdc0e6907cf10f8aabeae1 *man/popdynMICE.Rd
00aa9ce07c37305a0bce07f42fd1cac6 *man/popdynOneMICE.Rd
3b33b70551cba947f2a8ef1fad5cb81c *man/prelim_AM.Rd
9b9e6b388ad61199bd4b3e5fda57965a *man/prof-class.Rd
923c5e7e87de8e5f82fcfa727c3bf432 *man/profile.Rd
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5a8059618143679698fc911f14787659 *vignettes/MSEtool.Rmd
832380199e9804a781851fe50f17f5ef *vignettes/SCA.Rmd
b8e9167cce4e8bab5cf07803804a17e1 *vignettes/Surplus_production.Rmd
8321501008e59632d1a1c4b6fb26f0fb *vignettes/VPA.Rmd
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1fcbabee70935ffb47721fe8c93a1c5e *vignettes/fig_multiMSE/MICE.png
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e6170b0b5dba3bdf8887b8ccf37d38e2 *vignettes/multiMSE.Rmd
