2b2063f6e2bf36510b1e2aa3b485dbd4 *DESCRIPTION
b1e371c8a34e83dfcd38a1796e32b673 *NAMESPACE
a477f98316171467ce0973bff062772c *R/MAnorm2.R
f448b26218004dc2b620def9d44f8daf *R/MAnorm2_ops.R
1d250f75c789ab6193de64322eca47a9 *R/VST.R
abaf6026f5a6c2439f01c37c6b7a644f *R/bioCond.R
a2e5714c8be568be61bb7d7fd7375c87 *R/diffTest.R
6b8356336384aa76270f9b9f45d43418 *R/fitMeanVarCurve.R
d5542d5d4396f042fa86d488fc766437 *R/meanVarCurve.R
5c7ac57953c53d336d83c856499dcefb *R/normalize.R
1339a3c5aadf05b99cca099c7fe00756 *R/robustMeanVarCurve.R
38446dc26053487ce26f25bf4ce88df0 *R/show.R
8d8eee08afcfcfa74855a1539fe445c5 *R/util.R
76496fa260cdc2173b667f3e7368f6fa *README.md
1ec3905d1bb0207f03e5431b4cb6d0a6 *build/vignette.rds
006db9768dd5fc3b69269c33583c2440 *data/H3K27Ac.rda
54dc228903e294ebee415b027d978dc3 *inst/CITATION
25ca7a97ffac847185d5f7397ce40b81 *inst/NEWS
ea162e838784f5131ae2ef199a8b30e9 *inst/doc/MAnorm2_vignette.R
e94e30b99b70c6ad28013e176c7efb33 *inst/doc/MAnorm2_vignette.Rmd
238d0fa8696ea22f0f3f453f60e40514 *inst/doc/MAnorm2_vignette.html
17488e0f3941d85e53bd361029769db5 *man/H3K27Ac.Rd
0f9d78f8fa6a87124d780ee4afa38f8e *man/MA.pcc.Rd
00e1c9cdefafad5be46d968a6cefe397 *man/MAnorm2.Rd
773fccf9dbbd49b4d7612b9357861a0e *man/MAplot.Rd
b2c01986d60025b2cb2256bf090741f3 *man/MAplot.bioCond.Rd
bad5670e9fe4dd68836eb408d345bd63 *man/MAplot.diffBioCond.Rd
c863a9baf51574f150b1d06e87160766 *man/aovBioCond.Rd
f255945b5bdeee0f0a89f96e609171a1 *man/bioCond.Rd
62b6ac039564ab31faf62c64aa711450 *man/checkCountTable.Rd
1f5ecdd1f637c9d160d6128807ed7040 *man/checkIndex.Rd
a987bdfd2b114b6527728bb0f2363e7b *man/cmbBioCond.Rd
23b71ea01122581b4106a4d77aca1b34 *man/diffTest.Rd
7118d84ae891042d75577f6f6b7776c8 *man/distBioCond.Rd
5f8f10f19a126e8ce1da74baa3984ad9 *man/estParamHyperChIP.Rd
aec70178e7aa868421d7d039c068b205 *man/estimateD0.Rd
f48ff78ab3c7d5d5866281a366c0c780 *man/estimateD0Robust.Rd
42fc2a9633d252de2de90ce284fa58f9 *man/estimatePriorDf.Rd
6ab4f2c747483682b0797855eebf09a8 *man/estimatePriorDfRobust.Rd
a31b02bff49dbacd20994b0aca93130c *man/estimateSizeFactors.Rd
c707131aeb70b3777ac076378e3e4c79 *man/estimateVarRatio.Rd
9d0c7c2729c8a94a2f6885ffdf887ec9 *man/extendMeanVarCurve.Rd
3a23ddd0e47eb89bf1c0784ed25bd4b1 *man/fitMeanVarCurve.Rd
57ff37066e3934ae921f34fbd1571ea9 *man/intervalMeans.Rd
ae95ba3b66bf36161136adca5352e973 *man/intervalVars.Rd
384301234a2ee6faf92496a4e0d76436 *man/inv.trigamma.Rd
e5fdca23de9a948b9b293c757d06630d *man/isSymPosDef.Rd
bf101531e11f57478d0e45d73b75351a *man/meanVarLocalFit.Rd
10e828ee5a5ef22e2b621d442a384ab3 *man/meanVarParaFit.Rd
8343606a2d718d75458477d17ea7eac3 *man/mean_var_logwinf.Rd
0edc84ff433adae73ed43463e7c03f99 *man/mvcID.new.Rd
de3161195b5bf6a522e3c0af05c07545 *man/normBioCond.Rd
1ad578378bc1f4b5f8ca9061177b4a13 *man/normBioCondBySizeFactors.Rd
1ae4a57a284adf18c31f67c4ccbee0b9 *man/normCoef.Rd
b92f52d4167d2b9bc27f65d9ff55fbc6 *man/normalize.Rd
2f02d3a8457ba92f09350bc26e0ccbe4 *man/normalizeBySizeFactors.Rd
224b998ac64aad2d6dfc509982d9b403 *man/plot.aovBioCond.Rd
2c8732fda868a5ae150c00c9d0f6ed58 *man/plot.matrix.Rd
515ac82d95271508747202d3c0aa97e5 *man/plot.varTestBioCond.Rd
e46ea8af6b76be9562e85a2887062103 *man/plotMVC.Rd
350a71fa2f29f79e3a42f4383f031dca *man/plotMeanVarCurve.Rd
50114e836b83a6f6019debf8eec6b2c6 *man/print.bioCond.Rd
d099594053b80894f4477d2d94f9103d *man/print.summaryBioCond.Rd
0c5d4b293f902703e631e289b8cf8a04 *man/scaleMeanVarCurve.Rd
3bcbb4e0fefadee76fb1f56eafbae51e *man/scaleMeanVarCurveRobust.Rd
ec15d72cc4e0dbf833e5e6e0a95666cc *man/setMeanVarCurve.Rd
e7656a22ecef9dd9f7f3e4544fefb2b3 *man/setPriorDf.Rd
77358d55ac60a47f09b8049a93cbfb2d *man/setPriorDfRobust.Rd
0c55ca9c3c4bb4e84bc027e2d5cfdd70 *man/setPriorDfVarRatio.Rd
e1263a117430a76bc9646782e7e253c5 *man/setWeight.Rd
3fee185c9e9384a78aab02bd50b9cf09 *man/summary.bioCond.Rd
a67ea2c6b6418d26b7ea0a6454e53d5c *man/util.trigamma.Rd
66b9e8a7e7399c23f48eb273a71355ba *man/varRatio.Rd
eeb4b8479309c12ce9935581f17e3901 *man/varTestBioCond.Rd
7cd5d39d0eb61b0e617e8b1a1c2a8197 *man/vstBioCond.Rd
e94e30b99b70c6ad28013e176c7efb33 *vignettes/MAnorm2_vignette.Rmd
3ceea65f92af6887d67ebc962bb459c4 *vignettes/library.bib
