633441fdec40d8e6f0b86d661e16edb8 *DESCRIPTION
4f13998bbb62bbf68f25f646845570db *NAMESPACE
e060b55a99190a28e17a7e428d857aa7 *R/KEGGfunctions.R
a4a8be6889e20e099ffd626201a63c7f *R/QTL.R
7f074a79f5fca72a05ad5d590ed0e337 *R/aaa.R
f5da57b85d01bbddb000c6537a66b07e *R/cWrappers.R
621b6cbe727e9511508d66cc2b366d11 *R/columnLabels.R
f536b1b26acc886c9b0c262be2d58e86 *R/diverseFunctions.R
e18f19b4746cdb1f70ded19585ef10b2 *R/eqtl.R
6ad88127c5763ba63856f0c5b1c0d190 *R/eqtlDir.R
053cb957a38bda1f079a691a525727dc *R/eqtlLM.R
0a6e1ace23079e725ca45a5c534c86dd *R/faFunctions.R
8e0415d8bc997bda35c5326dd91ac5b4 *R/genotypePlot.R
166a7830d7650b36299ab2d173ec7a73 *R/getRSLocation.R
6cff11747fcc502e77cb5c558f2724fe *R/getRegionsOI.R
b7721cdb291117682bc10e2fabc74500 *R/getSNPlocations.R
3fc07a14612428b5030df992219b7280 *R/gtfToBed.R
1552fd4550137fbc06f60663403600f4 *R/joinEQTL.R
86980ab926c8e35e5e7cbbcc4aebc2c9 *R/joinEQTLsig.R
ffdbb6cf43b168cc29d0d3b3b0a18b6b *R/makeannotList.R
c9f58db3bb53b6d1a9d29b51af846ee1 *R/mdr.R
d558332c7dcbfa4b366fa1d62a6168cb *R/mdrEnsemble.R
269fabc6799e002e95f7bf69a21d2a2d *R/plot.eqtl.R
766fdc3b08da316e472bc9cbf5970aa5 *R/plot.eqtl.trans.R
172462b923d18e639033a877bf48c794 *R/plot.mdr.R
2f22cba24bec5721a0a62cf9769ec68e *R/plot.qtlRes.R
cf139d73a324c8f4be0b807ee9c650e4 *R/plotGeneLocation.R
9e0040e969d90a6e5fc48b4e64777818 *R/predict.mdr.R
2ca9b8c08ba64167281c0c5f72e15745 *R/print.PedMap.R
7a47c96fec40a3910ade49b6ddc336eb *R/print.eqtl.R
b926e4f95ba8b9ca6b6175620df63875 *R/print.mdr.R
91ef0980e6032d3c348154098131722e *R/print.mdrEnsemble.R
f4b050f686f3756a79791bddd4e4bbe4 *R/print.mdrPredict.R
9b44743f6670f02e695ab311648f0177 *R/print.qtlRes.R
58ab2a0efa2ada103f7803a43fe83ea1 *R/print.vcf.R
f7eb674e9c5834e5b21d48bcfd8c7f29 *R/rearrange.R
90b068fc137d749e1f96fac5596589e2 *R/recodeData.R
a18b1004a4d6583ff5049e4248c80a74 *R/summary.PedMap.R
e80089acf31af2f30f2bf1b7bffb97a6 *R/summary.eqtl.R
8e2a39329d8601337c27ea286ddbc472 *R/summary.mdr.R
76730bc1f3b89162709edef3c361ed4e *R/summary.qtlRes.R
ffb40e151715128794488dcc7ec2ca54 *R/visTrans.R
c35d104bdbac5852ac5581ce1ab3aba2 *build/vignette.rds
ae31c85721018c748bd2d076576bd2d6 *data/annotTrack.rda
15f4e218e22a88a580c25db7f4958135 *data/datalist
29a19f1467c2416d8a385e98e4c0fd19 *data/geneEXP.rda
5270b157ad130fb5d792ebe6825bd594 *data/genotData.rda
2006497e628f8d062c2086dda601adc3 *data/mdrExample.rda
6d50023a2d9cd4a70ff7f07365d2da7d *data/phenoData.rda
812343f096b87bf1ecdfac7b2048891c *inst/ChangeLog
83d9fc4e38d848fb5bd7e51b647d10cf *inst/doc/GenomicTools-Vignette.R
8e064be21104700b4b049edb05d8297b *inst/doc/GenomicTools-Vignette.Rmd
1a5019e8e9e3f28203f2c9fb9bb20573 *inst/doc/GenomicTools-Vignette.pdf
beda39225ec456ac47da23321983c60b *man/GenomicTools-package.Rd
7d4a9dbcd8a62da35a0a06d0f4c5106e *man/QTL.Rd
780a84b46751d71399275686f23a6d90 *man/annotTrack.Rd
89b048159a2e5fe71ea1b66ec1295904 *man/eQTL.Rd
62b7931526557f862abaf2a4c2307443 *man/geneEXP.Rd
78cc22c74470651d43117e263a1bbe3e *man/genotData.Rd
e4081ccf916fa21072ffe330a1d15d6b *man/getKEGGOrganisms.Rd
606c73a3516e170ce3b78e14ca08a488 *man/getKEGGPathway.Rd
a29ca55582d6bcfc656f318ca79085d0 *man/getKEGGPathwayImage.Rd
33fdce9344d840adce489bebb943938b *man/getKEGGPathwayOverview.Rd
0306cd9a6463cfb233d296849fbea344 *man/getRSLocation.Rd
4bdad842ea046400affe852bf7f79ac7 *man/gtfToBed.Rd
3a1eb690bc20d6d1824ff9ec3bc8ce31 *man/mdr.Rd
07ed3294b79d637c4bbfa18ddd547804 *man/mdrEnsemble.Rd
0e54d07c8cbd5916b5a8d89501c41830 *man/mdrExample.Rd
4bd070a3086ae2cfffc25a038511dc0f *man/phenoData.Rd
45629099981a92b0ded1484d3e729fec *man/plot.eqtl.Rd
d32b06dc88441aed96c3e69928f5aa74 *man/plot.mdr.Rd
919c000e4f6c1459c7716c782065232e *man/plot.qtlRes.Rd
58f48a6b31add749c8ff1c1ce589fcf8 *man/print.eqtl.Rd
2eaf045ddc0ed2a0cda7d2278d95aa49 *man/print.mdr.Rd
c299ce342c986ae9cffc37dce82552fa *man/recodeData.Rd
c10845a7380f41bc7670e50e3ebeefe3 *man/seqlength.Rd
894b84bb6e539bb231b0cacdbbe2989e *man/summary.eqtl.Rd
95a5e0dc5dbdec9c251c142cb4cad286 *src/Makevars
2a33ba1c4b4b0d46d9ed823230c620e1 *src/Makevars.win
ab35b35c35578b594b81ea042d2712a3 *src/RegisterRoutines.c
f6f0af5d6d2abffde49cd503459afde0 *src/mdr.cpp
8d64417297ba8c94dcad36f310bd7c7f *src/mdr.h
9cfd40128a6f7847f56c451b74bbd202 *src/timeCluster.cpp
7e111957e1619917a515787c7ee875d1 *src/timeCluster.h
8e064be21104700b4b049edb05d8297b *vignettes/GenomicTools-Vignette.Rmd
9a5abbe0386a0f0f51982a9d9165eae7 *vignettes/GenomicTools-Vignette.bib
29a28e4bb7ab3334592638a5abd3d599 *vignettes/MDR.png
fae2bcb1e3bfcf20675bf3fc620c3a7c *vignettes/QTL1.png
d5f56fdd035e4f427cd7d3fb2651b93e *vignettes/QTL2.png
a0e03ea606280ca1795fbdb80e1d6d50 *vignettes/cisEQTL.png
7ab25cfd0e263c0c294d8db97d195096 *vignettes/transEQTL.png
