3581632b174bb288dca1a7e7a6c8c5a9 *DESCRIPTION
4776e246c5e0d0608e3944805b402e03 *NAMESPACE
b3ad21999fa87a10d085fcf9dfa7de55 *R/QTL.R
f266dbfc03be84ebb62debf894baf9ff *R/aaa.R
f5da57b85d01bbddb000c6537a66b07e *R/cWrappers.R
621b6cbe727e9511508d66cc2b366d11 *R/columnLabels.R
5d5fad6702eb0c1d2d0bebba93ffff7b *R/eqtl.R
16bfa49840e7342c8e39cb5496715a96 *R/eqtlDir.R
c199554e4119b76ed663c738f246b9e9 *R/eqtlLM.R
e3306f780b0dc907204b9e2a8698ac12 *R/genotypePlot.R
6cff11747fcc502e77cb5c558f2724fe *R/getRegionsOI.R
e64b39e70f1c6db41fbf79dd7b731e17 *R/getSNPlocations.R
d6fc94e86741072206beb4f365e2ccfb *R/gtfToBed.R
e914885161f18e006a0ea3d1893e27cd *R/importGFF3.R
69954fb1e0436c2321683707c3c34d8d *R/importGTF.R
168674de1939f6379bcd9e69eae19184 *R/importPED.R
5d4820e1cea17a37c854b6016d12e73b *R/importSTARLog.R
f30e63854028d1dec1614d3909b75598 *R/importVCF.R
be957a7f1be11ee162b61cec6068469b *R/joinEQTL.R
86980ab926c8e35e5e7cbbcc4aebc2c9 *R/joinEQTLsig.R
ffdbb6cf43b168cc29d0d3b3b0a18b6b *R/makeannotList.R
56c7e86a8d815a861dc1a32b962eaf51 *R/mdr.R
d558332c7dcbfa4b366fa1d62a6168cb *R/mdrEnsemble.R
5996409eff30a94214851a222a0d0960 *R/plot.eqtl.R
db11833d328bdbdc0bcba3474caac383 *R/plot.eqtl.trans.R
9124891934681490a15fb75d6d626efd *R/plot.mdr.R
bfe09801f0f356815c0226017e0adc0a *R/plot.qtlRes.R
cf139d73a324c8f4be0b807ee9c650e4 *R/plotGeneLocation.R
9e0040e969d90a6e5fc48b4e64777818 *R/predict.mdr.R
311f564ec13a8cdad939a4ee13aba35e *R/print.PedMap.R
6b669b6d64fac5cd5b8c71fc6c720775 *R/print.eqtl.R
948b6ec81da15162f0b538ae524fcc5e *R/print.mdr.R
b97c931ef51539d992e5aa27351ad834 *R/print.mdrEnsemble.R
f4b050f686f3756a79791bddd4e4bbe4 *R/print.mdrPredict.R
61699496bc1e0940a2e8687f704ef1a1 *R/print.qtlRes.R
44e7369a388cbc6c35e0f8c9dd270c2a *R/rearrange.R
90b068fc137d749e1f96fac5596589e2 *R/recodeData.R
cc608cf00c4b1da87835f6c68d0436e2 *R/summary.PedMap.R
56d9399d1de234d02f2405d42b77e62f *R/summary.eqtl.R
8e2a39329d8601337c27ea286ddbc472 *R/summary.mdr.R
76730bc1f3b89162709edef3c361ed4e *R/summary.qtlRes.R
ffb40e151715128794488dcc7ec2ca54 *R/visTrans.R
06845a9759bc0f594544368e49d0cdb9 *data/annotTrack.rda
15f4e218e22a88a580c25db7f4958135 *data/datalist
c116044585d17ac1bbd48dec4292e872 *data/geneEXP.rda
6a099e48ecb5075e289cfa11cb2c7348 *data/genotData.rda
8f20109beeb9df338f78afd1775f3549 *data/mdrExample.rda
fc127398812b47b49baa6096333a21dd *data/phenoData.rda
4b7874d71543f99132bb4802c5f48cc0 *inst/ChangeLog
dbb04b3804ff05f9b6ca33d94a8c3a88 *man/GenomicTools-package.Rd
247f132caf5d76df3b5e4f929a38cde8 *man/QTL.Rd
780a84b46751d71399275686f23a6d90 *man/annotTrack.Rd
478c58558d0af978482c1b61c2ebdc77 *man/eQTL.Rd
62b7931526557f862abaf2a4c2307443 *man/geneEXP.Rd
78cc22c74470651d43117e263a1bbe3e *man/genotData.Rd
e8e2bc9333ccb4340c7ac21c8232dfb2 *man/gtfToBed.Rd
7d6b40fd9b650cfc1d7a7fc1248e9f97 *man/importGTF.Rd
9b4e13aa596ad1d9ab2f5b4e5e62c39d *man/importPED.Rd
c421ad1e43b0cc18a0125f1b219fe861 *man/importSTARLog.Rd
e85f9319db801d82d2ef77868e84a250 *man/mdr.Rd
07ed3294b79d637c4bbfa18ddd547804 *man/mdrEnsemble.Rd
0e54d07c8cbd5916b5a8d89501c41830 *man/mdrExample.Rd
4bd070a3086ae2cfffc25a038511dc0f *man/phenoData.Rd
45629099981a92b0ded1484d3e729fec *man/plot.eqtl.Rd
d32b06dc88441aed96c3e69928f5aa74 *man/plot.mdr.Rd
919c000e4f6c1459c7716c782065232e *man/plot.qtlRes.Rd
58f48a6b31add749c8ff1c1ce589fcf8 *man/print.eqtl.Rd
2eaf045ddc0ed2a0cda7d2278d95aa49 *man/print.mdr.Rd
c299ce342c986ae9cffc37dce82552fa *man/recodeData.Rd
64cbc40e834acb5a664ee91909634934 *man/summary.eqtl.Rd
95a5e0dc5dbdec9c251c142cb4cad286 *src/Makevars
2a33ba1c4b4b0d46d9ed823230c620e1 *src/Makevars.win
f6f0af5d6d2abffde49cd503459afde0 *src/mdr.cpp
8d64417297ba8c94dcad36f310bd7c7f *src/mdr.h
9cfd40128a6f7847f56c451b74bbd202 *src/timeCluster.cpp
7e111957e1619917a515787c7ee875d1 *src/timeCluster.h
9ec5d026224dfbeeb1da35e328d60187 *vignettes/GenomicTools-Vignette.Rmd
9a5abbe0386a0f0f51982a9d9165eae7 *vignettes/GenomicTools-Vignette.bib
5e2fa258d07bd1a4331a08a489f441a2 *vignettes/GenomicTools-Vignette.pdf
