27c5d49995636f8cb5c97d329bd71a07 *DESCRIPTION
5e075de42934a408cd7829c0f5057609 *NAMESPACE
1e99f53162dac4ed8008b5410e9d8f0a *NEWS.md
7034f1a6569fdee6ca6bdc33525bdd35 *R/RcppExports.R
767e9766da93dd588bba000b6a2460ec *R/catch-routine-registration.R
a6c1f4ce6b2d37574a08f1a89bc14297 *R/cluster.R
8a957988150205d68ccefea40369e324 *R/cluster_data_converters.R
9d868da5122b7ae3992c8889484ffe09 *R/cluster_object-getters.R
1952527e50ccf93678c7c6c682fef4ba *R/clustur-package.R
562f5024d892d44b383408f71e526e4a *R/distance_object-getters.R
8416eb96c8be958a66db7211b6b8e82b *README.md
4454e632feb75ce4f508807d50b3b12f *build/partial.rdb
193cd469589bc93ddd5dad310a2b6237 *build/vignette.rds
78a4d68fe0b67a332b7c9932e843ff48 *inst/doc/clustur.R
64f1f0826c8d9015c1aa6569ade7e049 *inst/doc/clustur.Rmd
b7ab6c24d95ca789a3d995bc93f5446a *inst/doc/clustur.html
369d139fdb5c0893b1b82ef97aaa01ac *inst/extdata/amazon.full.count_table
9eb2a743407fad65c1164a9e711f6493 *inst/extdata/amazon.sparse.count_table
e4f379690d24c3551a6314c481bafafd *inst/extdata/amazon_column.dist
4767aa890ebe404456f9a88479d4181f *inst/extdata/amazon_phylip.dist
86695cd91b7a4a4c3e3fd417fb6c05c9 *man/cluster.Rd
456b3bdcc9df9cfce26d241f7b9af388 *man/clustur-package.Rd
71dc529167bbe5035cc9d935c9a6c6c5 *man/create_sparse_matrix.Rd
f09820c1e8f90093660ca48fef7248c0 *man/example_path.Rd
2c7ad760f9a7548869f5773bfe4606f1 *man/get_abundance.Rd
799721b6159dfe10d48f56fec52bddaf *man/get_bins.Rd
fc6a90da9d4955292d9f1daac1a768a5 *man/get_count_table.Rd
7805decbd2123bdec9cae0d882914140 *man/get_cutoff.Rd
199a7401f5309fd7848a972d430cb4f5 *man/get_distance_df.Rd
73b1d7aa7db8a973671bb274ffc9a904 *man/get_metrics.Rd
5c8d19fc9f8e26bcc6ff6662df7576f6 *man/read_count.Rd
e3c056e200868d5c3af7ff4caa5a0e58 *man/read_dist.Rd
2656adc797c641be37533a0105f7cc61 *man/split_clusters_to_list.Rd
8d2be5010e44a5d45d9dcf22516b1ee6 *man/validate_count_table.Rd
c31d9b4402b1214150076b071afec14d *src/Adapters/CountTableAdapter.h
fc02895bcdf2d6ff96fe594e7d846105 *src/Adapters/DataFrameAdapter.h
6f57981212644725e40c524209ee781e *src/Adapters/DistanceFileReader.h
32837e717df802dad1366cdfff2f3c38 *src/Adapters/MatrixAdapter.h
be6d99526d5fd8930b4a223c7fd0becf *src/Adapters/OptimatrixAdapter.h
2435191adba00c9988c2eaee24e098da *src/AverageLinkage.cpp
9ca237d58f8500b20f2ae0397570f256 *src/Cluster.cpp
b3ff182de395affd481527b0951205ad *src/ClusterCommand.cpp
767b075c24769e751eec2c8ee34f7a51 *src/ClusterData.cpp
16f5f5cdc98eb2db47e7d98708956d62 *src/ClusterDataTestFixture.cpp
c92aff5f179b19f3598314750113f6b4 *src/ClusterExportTestFixture.cpp
d622f60d442e193673e517e4dced9809 *src/ClusterTestFixture.cpp
6432ad3dda4ebb621b214b22bb97a9ce *src/ColumnDistanceMatrixReader.cpp
4922ca8d162c8229d0043b603b40e35a *src/ColumnReaderTestFixture.cpp
7d79cf68c85da1bb65e04554c9134e58 *src/CompleteLinkage.cpp
a16751eed618e3edccc0d76c94f87be1 *src/CountTableAdapter.cpp
623c2e286d8a4237e9cb70bfba5f170e *src/CountTableAdapterTestFixture.cpp
ab2c4681911a486af9a8418b31215430 *src/DataFrameAdapter.cpp
75a720ce0632861eaa0138faf7ac9757 *src/DataFrameAdapterTestFixture.cpp
a2e9bf31a000e4fe62a16c4b4c675727 *src/DistanceFileReader.cpp
ddc5b6c10e55f63c2dd3566dcae992c3 *src/ListVector.cpp
9223dd87698f6193f3a6e134d4ab75b0 *src/ListVectorTestFixture.cpp
def93497cafea55a3b53f9c0b0a1a88b *src/MatrixAdapter.cpp
5d6a5c37797dc3ef7717816056704837 *src/MatrixAdapterTestFixture.cpp
26600457f0cb94a58163b79d4a72cb3a *src/MothurDependencies/AverageLinkage.h
cec98558f378a564b61f1e96f1cc030b *src/MothurDependencies/Cluster.h
5ef38251d69a5c2eb1021ba184511140 *src/MothurDependencies/ClusterCommand.h
c139b080da19ee4a85c09650dc74877a *src/MothurDependencies/ClusterData.h
862ccc438a414a696aa0730cdb22a02e *src/MothurDependencies/ClusterExport.h
0a1f57b5aebc30e3b4b03a0322e16c56 *src/MothurDependencies/ClusterMetric.cpp
1bd8ddaf77ff1f6a203ca042d5ef26c6 *src/MothurDependencies/ClusterMetric.h
33d49ca0929a4f1002a38f153417fb02 *src/MothurDependencies/ColumnDistanceMatrixReader.h
6b1a37b8b0d4c3d4d9b48316bdf22f9a *src/MothurDependencies/CompleteLinkage.h
a603d0ad135a571dbad8e1c88f7e5073 *src/MothurDependencies/CountTable.h
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299691a9c3b5d1dd0f52ca614bf0e11e *src/MothurDependencies/OpticlusterData.h
d013447a68d5cb9fdefb2bf23c8d4db3 *src/MothurDependencies/OtuAbundancePair.h
ddd2daf3bf42a866be1845099c22c55a *src/MothurDependencies/PDistCell.h
def9dc7fd4af9ed8968d7bd7a4b108bd *src/MothurDependencies/RAbundVector.h
7ce075f16790753f8fdfc39ec3e1a44c *src/MothurDependencies/ReadPhylipMatrix.h
1475f64e0b95c4815608bfd2631c5293 *src/MothurDependencies/SharedFile.h
1dcf22b0e7bcaa5857333f6cea41e985 *src/MothurDependencies/SharedFileBuilder.h
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fa28b3293b9ee6b8209895586955aee9 *src/MothurDependencies/SparseDistanceMatrix.h
1220c16c179b277c07097e146ecf8532 *src/MothurDependencies/Utils.h
518bfd59221e3d97e06df66a977a257a *src/MothurDependencies/WeightedLinkage.h
34300eb93aff96c442131f72c671b709 *src/OptiCluster.cpp
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09786b830d812330cd6b7084cde2bdbc *src/OptiClusterTestFixture.cpp
edce45a3ae1c67f2038faa8edef59391 *src/OptiData.cpp
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6dce580058268bd202d0c0ad64415323 *src/OptiMatrix.cpp
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32f209429685268ab8bec6292d6825bf *src/OptimatrixAdapter.cpp
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b8c96ce8274d849767a96f519ee176a5 *src/ReadPhylipMatrix.cpp
603b483ce1138b6d651825fa4a872e33 *src/SharedFile.cpp
0bafd6ab9ca3e55d6b01881d637298fa *src/SharedFileBuilder.cpp
1be0be8da62ef15ef16a7ef94ae2c25d *src/SharedFileBuilderTestFixture.cpp
75e8a0caff3c5d8c38b007bad799a34e *src/SharedFileTestFixture.cpp
1327aa8bc67e565aa97b601029fbab83 *src/SingleLinkage.cpp
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8bc4a1c9656b9340a9705b7f110dbea6 *src/SparseMatrixTestFixture.cpp
3f7cf0592713c853bd558ba090642670 *src/Tests/ClusterDataTestFixture.h
76603d2bbb75b1e8e0548575c2bd3681 *src/Tests/ClusterExportTestFixture.h
00ea0c2cd4a99bb60c33f3bbc9b18a8f *src/Tests/ClusterTestFixture.h
215f04537b7b05e7cda97f4c61a2b21b *src/Tests/ColumnReaderTestFixture.h
853abe69322d817c013e940e6af5ace5 *src/Tests/CountTableAdapterTestFixture.h
b8738c79e565dcba3cafd19b37b1fb37 *src/Tests/DataFrameAdapterTestFixture.h
ebe89559cf5ec41fbb0b757b2eccd47f *src/Tests/ListVectorTestFixture.h
0ee03e47eca847e1d216b7371011965b *src/Tests/MatrixAdapterTestFixture.h
5f2f1dd2b42f9bd789e23e33f41ca2e9 *src/Tests/OptiClusterDataTestFixture.h
c9d52a569f44441453bf0c28227177a7 *src/Tests/OptiClusterTestFixture.h
6c2e03c9f1a6417704791296d10dc3a4 *src/Tests/OptiDataTestFixture.h
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d6b4b5eba11548ceb7ddf6b4b30ab94f *src/Tests/PhylipReaderTestFixture.h
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d6431a4053c7b95def591da0615f411f *src/Tests/SharedFileTestFixture.h
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62fc3910238caae82fe8dc3aaa1cbedb *src/UtilsTestFixture.cpp
160d8fd642c7895880d4abfecd7a32ab *src/WeightedLinkage.cpp
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5242f7d5903d3088e1d3ff8bf5e83055 *src/test-OptiCluster_data.cpp
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7164d53670b1052262809f3318e902e8 *src/test-Shared_File_Builder.cpp
4db094b761aba2cb1a3c54f2a166df4c *src/test-cluster.cpp
c67c3b44ed3c42ad8b019b2ebf7d9e8c *src/test-cluster_export.cpp
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ed16f4a8504fc234ec6569f67ebbb616 *src/test-data_frame_adapter.cpp
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a6d0ebb7e45ecebc190cb7a8ec136d25 *src/test-opticluster.cpp
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c2cb0c30e10da611f9fbe56aea52f7a9 *src/test-runner.cpp
e71083e423a90608080c36027f65027f *src/test-sparse_matrix.cpp
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81596890337f6a0a2afe456fbec029da *tests/testthat.R
a5ee0f95814507a77cfd2c2adb8f7a77 *tests/testthat/extdata/abundance_results_opticluster.csv
4253268449a06b4168824ba5045665a5 *tests/testthat/extdata/amazon.count_table
369d139fdb5c0893b1b82ef97aaa01ac *tests/testthat/extdata/amazon.full.count_table
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4767aa890ebe404456f9a88479d4181f *tests/testthat/extdata/amazon_phylip.dist
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e0526543118eadd053aa3eb947764bdb *tests/testthat/test-test-opticluster.R
64f1f0826c8d9015c1aa6569ade7e049 *vignettes/clustur.Rmd
